Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0612 ATGGCAAGTCTGGCTAATCCTTGGTGGACCGGTCAAGTGGGGTTGCCGGGAGTTGAACCGGCAGGCAACTCCCCCACGCTCAAGCGCCACACCACCGATCTTTCCATCAACGATAGCAGCGGCCGCAACAACCGAGAAGAAGATGAAGAGAGAGACAACGGAGACGAGCCGAAGGAGGGTGCAGTCGACGTCGGGGCCCGCCGGCCAAGGGGCCGGCCTCCCGGCTCCAAAAACAAACCCAAGCCGCCCATCTTCGTCACGCGAGACAGCCCCAACGCCCTAAGAAGCCACGTGATGGAAGTTGCCGGTGGAGCTGACGTGGCAGAGAGTGTGGCCCAATTCGCAAGGAGGCGTCAGCGTGGCGTTTGTGTCCTCAGCGGGAGCGGCTCCGTTGCCAACGTCACCCTCCGACAACCGGCTGCCCCTGGAGCTGTTGTGGCCCTCCATGGCAGGTTTGAAATTCTATCCCTTACAGGTGCGTTCTTGCCGGGACCCGCCCCTCCCGGCGCGACGGGGCTCACGGTGTATCTCGCAGGAGGACAAGGACAGGTCGTCGGAGGAAGTGTCGTCGGGTCTCTAGTAGCGGCCGGACCGGTTATGGTCGTTGCTGCAACATTTGCTAATGCTACTTATGAAAGACTACCACTTGATGATGATGATGAGGGAGCTAGCGCCGCCGCACAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGTCGCCACGGGGAATCGGTAGCAGCGGTGGCCAGCCTCTGCCGGCCGGGCTTCCAGATCCGTCGTCTCTGCCTTTGTATAATCTGCCGCCGAATCTGATGCCCAACGGTGGTGGAGGGCAAGTGGGGCATGAAGCTTTTGCTTGGGCTCACGGAAGGCCACCTTACTGA 885 0.6136 MASLANPWWTGQVGLPGVEPAGNSPTLKRHTTDLSINDSSGRNNREEDEERDNGDEPKEGAVDVGARRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVVAATFANATYERLPLDDDDEGASAAAQGGGGGGGGGGGSPRGIGSSGGQPLPAGLPDPSSLPLYNLPPNLMPNGGGGQVGHEAFAWAHGRPPY 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0612 294 FunFam AT-hook motif nuclear-localized protein 94 221 - -
Alju06g0612 294 PIRSF ESCAROLA 17 294 IPR014476 GO:0003680
Alju06g0612 294 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 207 IPR005175 -
Alju06g0612 294 MobiDBLite consensus disorder prediction 25 39 - -
Alju06g0612 294 CDD DUF296 95 178 IPR005175 -
Alju06g0612 294 MobiDBLite consensus disorder prediction 1 91 - -
Alju06g0612 294 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 218 - -
Alju06g0612 294 MobiDBLite consensus disorder prediction 217 280 - -
Alju06g0612 294 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 290 IPR014476 GO:0003680
Alju06g0612 294 MobiDBLite consensus disorder prediction 40 66 - -
Alju06g0612 294 Gene3D - 94 223 - -
Alju06g0612 294 ProSiteProfiles PPC domain profile profile. 91 229 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0612 Alju-ChrAlju06 5239941 5241918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0612 4 294 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.824 2.22e-104 304