Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0608 ATGAACAGCTCAGAGAATTCGAGTGGCGAAGAGATTGATCAACTTGAAGATAGAGATTCAGGAGGAACAAGACGAAGTTATGAGTGCACATTTTGTAGGAGGGGCTTCACCAACGCTCAAGCATTAGGGGGTCATATGAATATCCACAGAAAAGACAGAGCCAACAAGGCCAAACAAATCACACCTAATAATAATTCTTCTTCTTCTCTTTCAAACAGATTTTCCATTGAGGATTATTCCTTTGCTCCAGCCTCACCTTTTCTTTCAGAAATATCTTCATCATCAGGCCAACAATCCTCAAAGTTTTACTCCATTTTCGAGGTTCATCAGGGAAATAACTATAACATGTATTTCCCGCCATCATCTGCAACAACAAACCCTAGAAACCCTTCTCCTGCTTCTTCATATGACTTTCCCTTTGAGTATCTTAATCCAAGGTCTCATCATCATTGCCATCACTCTGTGGATGTGAACCAAGAGCTTCTTGGCTCCAATTTGAGTCTCCAGATTGGCCCAACAAGTCATGTGGAAAGTAATCAGAAAGATGGTGAAGTGGACTTAGAGCTCCGACTTGGCCATCATCCATATTGA 591 0.4146 MNSSENSSGEEIDQLEDRDSGGTRRSYECTFCRRGFTNAQALGGHMNIHRKDRANKAKQITPNNNSSSSLSNRFSIEDYSFAPASPFLSEISSSSGQQSSKFYSIFEVHQGNNYNMYFPPSSATTNPRNPSPASSYDFPFEYLNPRSHHHCHHSVDVNQELLGSNLSLQIGPTSHVESNQKDGEVDLELRLGHHPY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0608 196 MobiDBLite consensus disorder prediction 179 196 - -
Alju06g0608 196 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Alju06g0608 196 Gene3D Classic Zinc Finger 6 80 - -
Alju06g0608 196 MobiDBLite consensus disorder prediction 173 196 - -
Alju06g0608 196 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 54 IPR013087 -
Alju06g0608 196 PANTHER OS07G0101800 PROTEIN 3 194 - -
Alju06g0608 196 SUPERFAMILY beta-beta-alpha zinc fingers 24 54 IPR036236 -
Alju06g0608 196 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0608 Alju-ChrAlju06 5169548 5170138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0608 27 71 C2H2 Transcription Factor Family AT5G43540 71.111 3.58e-17 72.8