Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0607 ATGGAGAGAAACAGTCTGATGAACAGCGACAAGACCCAAATGGTGAAAGAATATTGGAACAGAAAATCTCAGATAAGCTGTTGTGGAGGAGGAGATGATTATATGAATGGATTTTCATGGCCTCCAAGATCATACACTTGTAGCTTCTGCAAGAGGGAATTCAGATCTGCTCAAGCCCTTGGTGGCCATATGAATGTTCATCGCAGGGACAGAGCCAGGCTCAGGCAGTCACCACCTCCAACTCCAACTCATGAAACTCATCACTCCACCATGCTCAACCTAAATCTTAACCCTACCTCTGGTCCTGACTTTTCAGCCTCAACCATGTCTTTGTTACCATCTTCATCTTCATCTTCTTCTACAATGCTCAAAAAACCATTCTCTGTGGTTTCTCCTACACTTGCTTCTTCATCATCTTCTTATGATCTGAAAAAATGGGTTGTGGACGGTATCATGTTGAACCCTTCAAGCACCAAGGCCTCAGAATCTACAAAGATGAAGAATGCTACTTATGCACAAGAGGATGGTTGCAAAGCGGTTAAAAATGCTGACATCATTAGGTTGGACTTGCATATAGGTTTGCTTAGTGATTCCAAGGATGATTTAGATCTGGAGCTTCGATTGGGCACTTATGCTTAG 639 0.4288 MERNSLMNSDKTQMVKEYWNRKSQISCCGGGDDYMNGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRQSPPPTPTHETHHSTMLNLNLNPTSGPDFSASTMSLLPSSSSSSSTMLKKPFSVVSPTLASSSSSYDLKKWVVDGIMLNPSSTKASESTKMKNATYAQEDGCKAVKNADIIRLDLHIGLLSDSKDDLDLELRLGTYA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0607 212 SUPERFAMILY beta-beta-alpha zinc fingers 42 71 IPR036236 -
Alju06g0607 212 Gene3D Classic Zinc Finger 41 93 - -
Alju06g0607 212 Pfam C2H2-type zinc finger 45 69 - -
Alju06g0607 212 ProSiteProfiles Zinc finger C2H2 type domain profile. 45 72 IPR013087 -
Alju06g0607 212 SMART c2h2final6 45 67 IPR013087 -
Alju06g0607 212 ProSitePatterns Zinc finger C2H2 type domain signature. 47 67 IPR013087 -
Alju06g0607 212 PANTHER OS07G0101800 PROTEIN 21 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0607 Alju-ChrAlju06 5157831 5158469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0607 28 209 C2H2 Transcription Factor Family AT3G23130 40.476 1.01e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju06g0607 zf-C2H2_6 3.8e-07 CL0361