Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0592 ATGGATGGGCACAAGGGAAAGCATGAGAAGGCGAAGGATGAGGCGCGGTACCGGGGTGTGAGGAGGCGGCCGTGGGGGAAGTACGCGGCGGAGATTAGGGATCCGTCGAAGCAAGGGGCGAGGCTGTGGCTGGGGACGTTTGATACGGCGGAAGAAGCAGCCAGGGCCTATGATAGGGCTGCCTTCAACATGAGGGGCCACCTCGCAATCCTTAATTTCCCTAATGAGTATTATGCTCAACTGAGGCCCCCACCATATAATTGCTTCTTTGTGCCTCCTCCTCCGCCGCCTTCTCGCGGTCATGGCGGTGCAGGCTCATCGTCTGGTTCGCAAGTTTTTGAGTTTGAGTATCTGGATAATCAGGTGCTTGAAGACCTGCTTGAATCAGAAGAGGAGAAAAAGAAAAGGATGTGA 414 0.5483 MDGHKGKHEKAKDEARYRGVRRRPWGKYAAEIRDPSKQGARLWLGTFDTAEEAARAYDRAAFNMRGHLAILNFPNEYYAQLRPPPYNCFFVPPPPPPSRGHGGAGSSSGSQVFEFEYLDNQVLEDLLESEEEKKKRM 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0592 137 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Alju06g0592 137 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Alju06g0592 137 PANTHER DNA-BINDING DOMAIN 8 128 IPR044808 GO:0003700|GO:0009873
Alju06g0592 137 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Alju06g0592 137 Coils Coil 120 137 - -
Alju06g0592 137 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
Alju06g0592 137 Gene3D AP2/ERF domain 15 76 IPR036955 GO:0003700|GO:0006355
Alju06g0592 137 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Alju06g0592 137 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Alju06g0592 137 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Alju06g0592 137 MobiDBLite consensus disorder prediction 90 109 - -
Alju06g0592 137 FunFam Ethylene-responsive transcription factor 2 15 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0592 Alju-ChrAlju06 4971840 4972253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0592 14 134 AP2-EREBP Transcription Factor Family AT3G23230 60.938 3.27e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju06g0592 AP2 3.2e-17 CL0081