Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0591 ATGGACTCTTCCTTCTCCATCTTCCACTCTTCCACCTCCGAATTCTCCTCCGATTCCTCCTTCGCCTCCTCTGATTCCTTCTTCTCCTGTAACTTTCCCACCTCTTACCTCCCCTTCAACGAGAATGACCCCGACGAGATGCTTCTCTACGGCATGATTTCCGAGGCCAACCACAATGATGGCCCCCATGAATCTTTCTATTCTGTCAAGGAGGAGGAGGTCAGCTCCGACGCATCTGCTTCCGCCGCCGCCGCCGCCACCCCCAAGGAGAAGAGCTACAGAGGCGTGCGGCGGCGCCCCTGGGGGAAATTCGCGGCGGAGATAAGGGATTCCACCAGGCACGGCATAAGGGTGTGGCTGGGGACCTTCGATAGCGCAGAGGCGGCTGCTTTAGCCTATGATCAAGCCGCGTTTTCCATGAGGGGATCAGCGGCGATACTGAACTTCCCGGTGGAGAGGGTGAGGGAGTCTCTGAAAGAGATGAACTACGGATCGGAAGAAGGCTGCTCGCCGGTGGTGGCTCTGAAGAGAAAGCACTCGTTGAGAAGAAAAGTGAATAGTAACAAGAAGAAGAACAGGGCAGAGAGCATAGACATGAGAATAGACAATGTGGTGGTGCTCGAAGATCTGGGCTCAGATTATTTGGAACAACTCTTGATGTCCTCGGAGAATCCTAGGCCTTCAGAATCTCATTGCCTCAATGTTCATTAA 711 0.5373 MDSSFSIFHSSTSEFSSDSSFASSDSFFSCNFPTSYLPFNENDPDEMLLYGMISEANHNDGPHESFYSVKEEEVSSDASASAAAAATPKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVERVRESLKEMNYGSEEGCSPVVALKRKHSLRRKVNSNKKKNRAESIDMRIDNVVVLEDLGSDYLEQLLMSSENPRPSESHCLNVH 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0591 236 SMART rav1_2 92 156 IPR001471 GO:0003700|GO:0006355
Alju06g0591 236 PRINTS Ethylene responsive element binding protein signature 93 104 IPR001471 GO:0003700|GO:0006355
Alju06g0591 236 PRINTS Ethylene responsive element binding protein signature 116 132 IPR001471 GO:0003700|GO:0006355
Alju06g0591 236 CDD AP2 91 151 IPR001471 GO:0003700|GO:0006355
Alju06g0591 236 Gene3D AP2/ERF domain 91 152 IPR036955 GO:0003700|GO:0006355
Alju06g0591 236 FunFam Ethylene-responsive transcription factor 2 91 152 - -
Alju06g0591 236 SUPERFAMILY DNA-binding domain 92 152 IPR016177 GO:0003677
Alju06g0591 236 PANTHER DNA-BINDING DOMAIN 55 222 IPR044808 GO:0003700|GO:0009873
Alju06g0591 236 Pfam AP2 domain 92 142 IPR001471 GO:0003700|GO:0006355
Alju06g0591 236 ProSiteProfiles AP2/ERF domain profile. 92 150 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0591 Alju-ChrAlju06 4907693 4908403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0591 37 224 AP2-EREBP Transcription Factor Family AT3G23240 60.733 4.03e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju06g0591 AP2 8.9e-15 CL0081