Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0578 ATGGTGAGAGCTCCATGCTGTGAGAAGATGGGACTGAAGAAGGGTCCTTGGACTCCTGAGGAAGACCAACTCTTGGTCCTCTACATTAACAAACATGGCCATGGCAATTGGCGAGCCCTCCCTAAGCAAGCAGGTCTTTTAAGATGTGGGAAAAGTTGCAGACTGAGGTGGATCAATTATTTGAGGCCAGATATAAAGAGAGGAAATTTCACAGCAGAAGAAGAAGAAACTATCATTAAGCTCCATGACAAGCTTGGCAACAGGTGGTCAGCAATTGCGGCAAAGTTACCAGGAAGAACGGACAACGAGATTAAAAATGTGTGGCATACCCATTTGAAGAAGAAGCTTCAAAAAACAAATGATCAAGCTCATCAAGCCATTCGTCATTCAGGTTCCAAAACCAGAGGCTCCATTAATAATAATAATAATAAAGCTTCAATCAAACGATGTGTTTCAAATTCCAGCACTGTGACAAGTCAATCAGAAGCTGCAAGTTTCATCACTTCATCCTCTACTTCTAGTGATTGTGGGCAGAGTTTGAAAGTGGCCATTAAGCGTGAAGACATAGATTCATCTTCTCTTGATGAGCCTTATGTTTTGCCTCAGATTGATGAAAGCTTTTGGACAGAAGCAGCCATGGAAGATGATAATAATAGCAGCAGCACCATTAATATTCAGAATAATAATGAAATATTTCCAGTTCATCATCAATACCCATTTGACGATGGAATGGATTTCTGGTATGACGTCTTCATCAGATCAGGGGATTTTACAGGGTTGACGTTCTGA 789 0.4106 MVRAPCCEKMGLKKGPWTPEEDQLLVLYINKHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTAEEEETIIKLHDKLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLQKTNDQAHQAIRHSGSKTRGSINNNNNKASIKRCVSNSSTVTSQSEAASFITSSSTSSDCGQSLKVAIKREDIDSSSLDEPYVLPQIDESFWTEAAMEDDNNSSSTINIQNNNEIFPVHHQYPFDDGMDFWYDVFIRSGDFTGLTF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0578 262 CDD SANT 69 112 IPR001005 -
Alju06g0578 262 SMART sant 66 114 IPR001005 -
Alju06g0578 262 SMART sant 13 63 IPR001005 -
Alju06g0578 262 CDD SANT 16 61 IPR001005 -
Alju06g0578 262 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju06g0578 262 FunFam MYB-related transcription factor 13 66 - -
Alju06g0578 262 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Alju06g0578 262 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju06g0578 262 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju06g0578 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju06g0578 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju06g0578 262 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 221 - -
Alju06g0578 262 Gene3D - 68 149 - -
Alju06g0578 262 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Alju06g0578 262 Gene3D - 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0578 Alju-ChrAlju06 4748628 4750528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0578 1 251 MYB Transcription Factor Family AT2G31180 50.195 1.92e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju06g0578 Myb_DNA-binding 1.8e-15 CL0123