Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0517 ATGTTGCAGGATGTGATTCACGCGCCACCGCAAGCTCCACCCCAGGAGGAGGAGGAACTTACCAACATTACAGCAATTGGGGACTTGTATTTGCTTTTATATCACTCGGTGCAGGATGAAATCTCAAGCCCCATTAGTGCCCGAATTTTCGAGCTTTGTGACCCTGATTTGTTCCCAGAGGCCCTGCAGAATTCTGAGGTTACCTCCAGCTCAAACTGTTGCTATGAAGATAACTCCTCCTATGCCCAAAATATATCTCTACCTTTAGATGTAGACAATAAATTCAACACTTGCAATACAATCACCACCCAAACTAGCACAAATCCGGCCACCACCACCACCGCCCCGGCCGATCGTACAGCCACCATTACCACCAACAACAACAACACAACCAACAGTAGCAATCTGTCCATTATCTTTGACCCACAAGATGAAATTGACAATGACATTTCTGCCTCCATAGATTTCTCATCATCTCCTGCTTTTTCTGTCCCTCAATATCTGCCAGTCACAACTCAACAGGATCAGCAATTTGATTTCTCTTCACTGCAGCCTCGGGTCACACTTGCTGTAAGTTCAGTTGTGGATGGCCTTGCACAATACCCACCAGACTCTGCTGTTGCACCTCTCATGGGGGCTCCATTAGCTTCTGTTTTTGAAGATGATTGCTTAACTTCTGTCCATTCTTATGTGCCTCTGAACCCTTCATCTCCTCCTTGCTCTTATCTTAGCCATGGCATGGGACCTTACATGCCTCTTGGTCCCCTTAATACTGCCATGTCTGCTGATGGTTCTGGGATATATGGCAGCACCATTATTCTGGGTTCTGATCTGCAGCCACAAGAACTGGATTACCAGGGAGAAAATGGTGGACTTTTTTGTCCAGATTCAATTCAAAGGGTTTTCAACCCTCCAGACCTCCAGGCATTTAGTGCTGAGAATCAGCAATTGATATCTGGGGCTGCAAGTTCCACCACTTTGACACCAGAAATATCAAACTTGGAGGATAATAGCTACAAGGTTGGGAAACTCTCTGTTGAACAGAGGAAAGAAAAGATTGGTAGATACTTGAAGAAAAGGCACGAGAGAAACTTCAGCAAGAAAATCAAGTATGCTTGTCGCAAAACTCTAGCAGATAGCCGGCCTCGGGTTAGGGGAAGGTTTGCAAAGAATGATGATTTTGGAGATACTCATAGACCTGCTAGTAGCAATCATGAAGAGGATGATGAAGACGACATAGTTGTGAAGGAAGAAGATGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTAA 1344 0.4472 MLQDVIHAPPQAPPQEEEELTNITAIGDLYLLLYHSVQDEISSPISARIFELCDPDLFPEALQNSEVTSSSNCCYEDNSSYAQNISLPLDVDNKFNTCNTITTQTSTNPATTTTAPADRTATITTNNNNTTNSSNLSIIFDPQDEIDNDISASIDFSSSPAFSVPQYLPVTTQQDQQFDFSSLQPRVTLAVSSVVDGLAQYPPDSAVAPLMGAPLASVFEDDCLTSVHSYVPLNPSSPPCSYLSHGMGPYMPLGPLNTAMSADGSGIYGSTIILGSDLQPQELDYQGENGGLFCPDSIQRVFNPPDLQAFSAENQQLISGAASSTTLTPEISNLEDNSYKVGKLSVEQRKEKIGRYLKKRHERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTHRPASSNHEEDDEDDIVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0517 447 Pfam CCT motif 349 391 IPR010402 GO:0005515
Alju06g0517 447 MobiDBLite consensus disorder prediction 387 406 - -
Alju06g0517 447 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 126 408 IPR045281 GO:0009909
Alju06g0517 447 MobiDBLite consensus disorder prediction 387 411 - -
Alju06g0517 447 ProSiteProfiles CCT domain profile. 349 391 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0517 Alju-ChrAlju06 4240349 4244155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0517 349 407 C2C2-CO-like Transcription Factor Family AT5G57660 46.875 4.49e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju06g0517 CCT 3.1e-19 CL0281