Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0505 ATGACTCTGGGTTTACTAGGTGGCGGCGGCAATGGTGGCTCTTCTGGGGCCACCCCAAATGTGTCTTCTGTGTCAAATGCTAAGGTTCTGGCTCAAGAATGTTCTTCATCGTACAAAGGTGAGGCTGAACTTGAACTGGGTTTGGGTCTGAGCCTTGGTGGTGGTGGTGGTGGTGGGAAGGCCAAGCCTTCTTCTGCATGGGGTGAGTGTGGTCGTATTTTGACGGCTAAAGACTTCCCTTCTGGAGTCTCTCATGGACCTTCTGTTGCTGCTTCTCGTTTCTCAGATAGAGTCAGTACTGTGGGTGGCTCTGTCTCTGGTACCAAGAGAGCCGCTGACTCTGTCTCTCATGACGCTGGTTCTCCCACTGCTGTCAGTCAACTTGTTGGGTGGCCACCCATCAGGGCATATAGGATGAATAGCTTGATTAACCAAGCAAAGGCTCAGAGGGCTGAAGAAGATAAATCCGGCGGCGACAAGAATAATCCTGATGATGTTTCAGTTACTAAAACTGGCGCTGTCAACAACACTGAAAAAAACCATCTTGGTTTTGTGAAGGTGAATATGGATGGAGTTCGCATTGGGAGAAAGGTAGATTTGAATTCTCATTCAAGCTATGAGAATTTAGCTCAAACTCTGGAAGACATGTTTTTCAGGCCTGCTAAATCAACTGGGTGTGAGAAAGAGCCCGGAACGAAACTCTTTAAGCTTTTGGATGAAACATCTGAATTTGTGCTGACATATGAAGATAAAGAGGGTGACTGGATGCTTGTGGGAGATGTTCCCTGGAGGATGTTCCTCAGCTCAGTGAGAAGGCTCCGAATCATGAGAACATCTGAGGCCAATGGACTTGCTCCTAGATATCAAGAGAAGAATGAGAGGCTAAGGATCAAACCCATTTAG 903 0.4729 MTLGLLGGGGNGGSSGATPNVSSVSNAKVLAQECSSSYKGEAELELGLGLSLGGGGGGGKAKPSSAWGECGRILTAKDFPSGVSHGPSVAASRFSDRVSTVGGSVSGTKRAADSVSHDAGSPTAVSQLVGWPPIRAYRMNSLINQAKAQRAEEDKSGGDKNNPDDVSVTKTGAVNNTEKNHLGFVKVNMDGVRIGRKVDLNSHSSYENLAQTLEDMFFRPAKSTGCEKEPGTKLFKLLDETSEFVLTYEDKEGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRYQEKNERLRIKPI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0505 300 MobiDBLite consensus disorder prediction 1 21 - -
Alju06g0505 300 Gene3D - 176 290 - -
Alju06g0505 300 MobiDBLite consensus disorder prediction 145 173 - -
Alju06g0505 300 FunFam Auxin-responsive protein 177 288 - -
Alju06g0505 300 MobiDBLite consensus disorder prediction 103 123 - -
Alju06g0505 300 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 43 283 IPR003311 GO:0005634|GO:0006355
Alju06g0505 300 Pfam AUX/IAA family 88 287 IPR033389 -
Alju06g0505 300 ProSiteProfiles PB1 domain profile. 182 280 IPR000270 GO:0005515
Alju06g0505 300 SUPERFAMILY CAD & PB1 domains 183 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0505 Alju-ChrAlju06 4162384 4164619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0505 185 298 B3 DNA Binding Superfamily AT1G59750 33.913 5.87e-13 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju06g0505 AUX_IAA 7.6e-62 CL0072