Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0485 ATGGCTAGCTGCTTGATCACCTCCTCTATGTTGATCTGTTTACTGTTTTTGGTGCTTCTTTCTTCTTCTTCTTCTTCTTTAGGTGTAATAGTGTCAAATGGTGGCGATGGAGATTATACAAGCATAAGTGAAGCCATAGCAAAAGCTCCGAGCTTTAGCAGAAGGAGATACATAATAGAGGTGAAAGGTGGGATCTACGAGGAGTATCTCAGAATCCCCCCCGACAAGACCAACATTCTGCTCATCGGAAGTGGCCCCCAACTTACAAGAATTACTGGTAATCGAAACACTGCCACCGATCAAAGTGCCACCCTAGCGATATATGGATCAGGGTTCGTGGCAAAAAACCTAGCGTTCGCGAACACCGCAGGGAGCGACGCCGGGCCAGGAGTGGCCGTATTCAACCAGGCGGATCAAAGCGCCTTCTACAAATGCTCCATCGAAGGCTTCCAAGACACGCTATGGGCCGTCGCTGGCCGCCAATTCTACCGAGACTGCGACATCTACGGCACCGTCGACTTCGTCATGGGCGACGCCGCCGCCCTCTTCCAGAACTGCAACCTCTTCGCCAGACCCAAGGATTTCATCACCTTCACCGCCCAATCTCGCTCCTCCGACCGCGAACCCACCGGCTTCGTCTTCCAGTTCTGCCACTTCACGATCTCGGCCGAGGACGCAGGTCAGAAGTCGGAGGTGATAAGAGCGACTTTAGGGAGGCCATGGAGGGCGTATTCGAGGGTGGTGATAATGGAATCGTACATCGATTCACTGATAGATCCGAAGGGATGGGAAATTATGTACGGGACGGCCCGTACGGACAAGTTGAGTTACATAGAGTATCAGAATGAAGGGCCGGGGGCGAATAGTGATAAGAGGGTGAAATGGCCTGGCGTTAGGGTTGTCGATGATCCCAAGGAAGTCGAAGGCTTCACTGCTTCTGCGTTTTTGGGCGGCGGTGATTGGATTCCTCAGCTTCGGATTCCGTATCATCCAGGTCTCTAG 1002 0.524 MASCLITSSMLICLLFLVLLSSSSSSLGVIVSNGGDGDYTSISEAIAKAPSFSRRRYIIEVKGGIYEEYLRIPPDKTNILLIGSGPQLTRITGNRNTATDQSATLAIYGSGFVAKNLAFANTAGSDAGPGVAVFNQADQSAFYKCSIEGFQDTLWAVAGRQFYRDCDIYGTVDFVMGDAAALFQNCNLFARPKDFITFTAQSRSSDREPTGFVFQFCHFTISAEDAGQKSEVIRATLGRPWRAYSRVVIMESYIDSLIDPKGWEIMYGTARTDKLSYIEYQNEGPGANSDKRVKWPGVRVVDDPKEVEGFTASAFLGGGDWIPQLRIPYHPGL 333
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0485 333 PANTHER PECTINESTERASE 29 323 - -
Alju06g0485 333 Gene3D - 24 333 IPR012334 -
Alju06g0485 333 SUPERFAMILY Pectin lyase-like 24 332 IPR011050 -
Alju06g0485 333 FunFam Pectinesterase 4 26 333 - -
Alju06g0485 333 Pfam Pectinesterase 29 318 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju06g0485 Alju-ChrAlju06 4018189 4021093 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0485 25 329 Carbohydrate Esterase AT4G02320 43.590 1.78e-88 273