Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0484 ATGGCTAATTATTCAATCACAATACCGTGCTTCATCTTTCCCTTGCTAGTTCTACAACTCATCTCATCTTTAATATTGTTGGCTTCTCCTTCTTCTTCTTCTGCATTTACAGTGTCCATCAATGGCGACGGAGATTTCACCACAATCGGCCAAGCCATAGCAGCAGCTCCTTCCTACAGCAACACCAAACACACCATCCTCGTCCGACCAGGAATCTACGAGGAACATCTCCAAATCCCCCGCGACAAAACCAATATTCTTCTCATCGGTGACGGCTGCCACAATACCATCATCCTCGGACACCACAATGGTGGCACATTGTCTCCAACGGCCACCTTAGCAATTCACGGAGCGGGCTTCGTGGGCCAAGGTATGGCCATTGTGAATTCAGCTGGGCCGAATGCAGGCCCAGGAATAGCTTTGCTGAACACGGCGGACCTGTCGGTGTTGTACAACTGCTCCGTCGAGGGCTTTCAAGACACCTTGTGGGCTTCATCGGGCCGTCAATTTTACCGGGAATGCCACATCTACGGCTCCGTCGACTTCGTCATGGGGAACGCCGCTGCCGTTTTCCAAAACTGCATGCTCTACGCCCGCCTCATCACCGGCTTCTCCGCCTTCACCGCCCAGTCCCGCGACGACCCTCTGCAACGCACCGGTTTTGTTTTCCATTACTGTCGTTTCACGGTGTCTCCGGAGGACGCCGGGAAGCAATTATCCGGTGCGGACAAGGCTATTTTAGGACGGCCGTGGAGGGCGTATTCGAGGGTGGTGATCATGCGGTCGTATATTGATGATATAGTGAGTCCGATGGGGTGGGGAGAGATGAAGGGGACGCCGACAGATAAGGTGGCTTACATGGAGTTTGAGAATGAAGGGCCTGGATCAAGTACACGTGGCAGGGTGAGGTGGATTGGTGTTGTGGAGGTGCACGATAAGGAACAGGTGGAAGAGTTCACCGTCTCGAGGTTCATAAAAGGGGATGATTGGATTCCTCCCACTGGGGTTCCATACATTGGAGGATTATAA 1029 0.5267 MANYSITIPCFIFPLLVLQLISSLILLASPSSSSAFTVSINGDGDFTTIGQAIAAAPSYSNTKHTILVRPGIYEEHLQIPRDKTNILLIGDGCHNTIILGHHNGGTLSPTATLAIHGAGFVGQGMAIVNSAGPNAGPGIALLNTADLSVLYNCSVEGFQDTLWASSGRQFYRECHIYGSVDFVMGNAAAVFQNCMLYARLITGFSAFTAQSRDDPLQRTGFVFHYCRFTVSPEDAGKQLSGADKAILGRPWRAYSRVVIMRSYIDDIVSPMGWGEMKGTPTDKVAYMEFENEGPGSSTRGRVRWIGVVEVHDKEQVEEFTVSRFIKGDDWIPPTGVPYIGGL 342
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0484 342 Gene3D - 33 342 IPR012334 -
Alju06g0484 342 Pfam Pectinesterase 37 328 IPR000070 GO:0030599|GO:0042545
Alju06g0484 342 PANTHER PECTINESTERASE 36 332 - -
Alju06g0484 342 FunFam Pectinesterase 4 32 342 - -
Alju06g0484 342 SUPERFAMILY Pectin lyase-like 31 341 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju06g0484 Alju-ChrAlju06 4011214 4012585 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0484 33 342 Carbohydrate Esterase AT4G02330 44.514 3.10e-86 269