Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0472 ATGAGGAATCGGGAACCTATTTTGGTATTCCGGGAGTGGAGATTGGATGTTCTTAATTATGCTACTTCAATCAATTTCAGAGTTGGAACTCAAGTTTTTGTTGAGGACCCTGAGGTAGCTTGGATAGATGGAGAAATTGTGGAAACTAATGGCGAAGAGATCAAAGTCAAGTGTGCATCAGACAAGACGGTTGTGGTCAAAGCATCCAATGTCCATCCCAAGGATCCTGAGTTCCCTCCTTCTGGTGTGGATGATATGACAAGGCTGGCATATCTGCATGAGCCCGGGGTTCTCCAGAATTTGCAGATTCGATATGACAACAGTGAAATATATACATACACAGGGAATATATTGATTGCTGTGAACCCTTTTCAAAGATTACCTCATTTGTATGGACACGATGTGATGGAAAAGTATAAAGGTGCAGCGATTGGTGAATTGACCCCACATCCTTTTGCAATTGCTGATTCTGCATATAGGATGATGTTAAACGAAGAAACAAGCCAAGCAATTTTGGTCAGTGGTGAAAGTGGAGCCGGCAAAACTGAGAGCACAAAGATGCTTATGCATTATCTTGCCTTTATGGGTGGGAGAAAGGAATCTGAGGGACGATCAGTGGAGCAGCAAGTTCTAGAGTCCAATCCTGTTTTAGAAGCATTTGGCAATGCAAAGACAGTTAGAAACAATAATTCAAGTCGATTTGGGAAGTTTGTGGAGCTACAGTTTGATCATAGGGGGAGAATTTCAGGAGCTGCTATTAGAACATATTTGCTGGAACGATCCCGCGTCTGTCAAGTTTCAGATCCTGAGAGAAACTACCATTGTTTTTACATGATTTGTGCTGCACCAGAAGAGGATCTTAAAAGGTTTAAATTGGAAAATCCAAGAACATATCATTACTTAAACCAATCAAATTTCTTCGAATTGGATGGATTGGATGAATCCAAGGAGTACCTTGCAACTAGGAGAGCTATGGAGGTTGTTGGAATCAATTCTGACGAGCAGGATGCTATATTCAGAGTAATAGCTGCAATACTTCATTTAGGAAACATTGAATTTCAGAAGGGGGATGAGCCGGATTCCTCTGAACCCAAGGATGATCAATCTCGTTCCCACCTAAAAACCACAGCTGAACTTTTGATGTGCGACGAGAAGTCGCTTGAGGACTCCTTGTGCAAACGTGTCATGGTAACACGTGGTGAGGCCATAACAAAGTGGCTTGATCCAAATTCGGCAGCTCTCAGCAGAGATTCATTGGCCAAAGTAGTTTACTCAAAGCTGTTTGACTGATCCAAATGCGAAGAACTTAATTGGGGTTCTGGATATATACGGATTCGAGAGTTTCAAGACAAACAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTAACTGGAGTTATATAGAGTTCATTGATAATCAGGATGTCCTTGATCTCATCGAGAAGAAACCTGGCGGCATCATTGCTCTTCTTGATGAGGCTTGTATGTTTCCAAGATCAACACACGAAACATTTGCCGAAAAGTTATATCAAACTTATAAAGACAATAAACGCTTCAGCAAACCAAAGTTGTCTCGTACTGATTTCACCATCTGCCACTATGCTGGTGATGTCACCTATCAGACTGACTTTTTCCTTGACAAGAATAAAGACTACGTTGTCCCAGAGTTCGAGGCACTACTCAACGCTTCAAAGTGCTCCTTCGTTTCAGGATTGTTTCCACCTCCACCTGAGGAAACTTCCAAGTCATCAAAGTTCTCCTCAATAGCCACCCAGTTTAAGCAACAACTACAATCTTTGCTTGAAACGCTGAATGCTACGGAGCCACATTACATTCGTTGCATAAAGCCGAATAATCTTCTCAAGCCAAGGATATTTGAGAACACTAATGTTTTACAGCAGCTTCAATGTGGGGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATACCCTACTAGAAAGCAATTTGATGAATTTGTTAAGCGGTTTGGAATTCTTGCACCTGATGCTCTGAAAGAATGCCCTGATGAAAGGACTGCTTGCGTGAAGCTGCTAGGACAAGTGAATCTTGAAGATTATCAGGTGGGCAAGACTAAAGTATTTCTGAGAGCAGGACAGATGGCAAAACTGGATGCATTTCGTGCTGAAGTCTTGGGACGATCTGCAATCATTATTCAGACCGTTTCCATTCAAGCCGGCATGCGCTGCATGGCGGCTAGAAATGGGCTCAAATGCAGAAGGCGGACGGAAGCTTCAATTGTCATCCAAACTCACTGCCGAGGTTATGTAGCCTACCTCCAACTCCAGAGGCTAAGGGAAGCAGCACTCGTTATACAGTGTATCTCGAGAGGACAAATGGCTCGTAATGAACTTCGAAAGCTTCAAATGGCTGCTAGGGAAACTGGTGCTCTCAAAGCTGCCAAAGAAAAACTTGAAAAGGAAGTTGAAGAACTAAATTCTTCTCTACAAATGGAGAAGAAGATGATGGCTGACGTTGAACAGAAAAATGGAAAATTGCAATCTGCCTTGGAAGAGACTAAGGAGGAAAATTCAAAATTGCAATCTGCCTTGGAAGAGACTAAGCAGGAAAATTCAAAATTTCAATCTGCTTTGGAAGAAATTAAGGTGGAAAACGCAAAACTGCAAACTTCCTTGGAAGAGACCAGGGCATTGCTCTTTCAGGAGCGCCAGGCAGCAAAAAATGTGGGTGAGCCAAATTCTAATACAGAAGAGTTTCCTGTTATTGATAATGATTTGATCAAGAAGTTAACAACAGAAAACGAACATCTCAAGGAACTGGTTAAGTCACTGGAAAAGAAAGTTGTTGACACCGAGAGGAAATCTGTAGAAAGTGAGGGCAAGCTTACTCAAGACGAAGATGCTAAGTCACCATCCATTCAAGAGCATGATGCAGCAAGCCAAGCAGTTGATTTATCTTCTGGTTTACTTGAATTTCCAGTTGGTGACAATGAATTGAACAATAAGCTTGCTGCAGAGAATGAACATCTCAAGGCACTGGTTAATTCATTAGAAAAGAAAATTGACGAAAGTAACGGGCTTAGTGAAGAGCGCTTGAAGCAAGTGACAGAGGCTGAAACGAAAGTAATTGAGCTGAAGATGGCTATGCAGAGGCTTGAAGAAAAACTATCTGATATAGAAACAGAGGATCAGATTTTGAGGCAGCAGGCTCTACTGAGTTCCTCTTCTAGGAGAATGTCAGGAAATTTATCATTTTCTAATTCTCAGCCTTCAGAGAATGGTCATGGTGATGCAAATACTTCAAGAAAAAAATTTGGTACAGAGGCTGATGAGTTGAGGAAATCTCTGGTTGAAAGACAACAAGAGAGTGTAGAAACTCTTCTGAAATGCGTGGCAGAAGCAGACCTTGGGTTCAGTGAAGGGAAACCGGTTGCAGCTTATTCCATTTATAAGTGTTTTCTGCACTGGAAATCTTTTGAAGCAGAAAAGACAAGTGTATTTGATCGTCTTATTCAGTTGGTTGGTTCTGCTATAGAGGATCAGGACAATAATGATCACATGGCTTATTGGTTATCCAATTCATCTGCATTGTTATTTATTCTTCAGCAAAGTCTCAGACCACCTTCAGCACAGAAGCCTCCTCCCCCTGCAACATCTTTTTTCGGAAGGATATCCCAAAGTTTTCGTTCATCTACTGCCGGTACCTCACTTGATACAATTCGCCATGTTGATGCCAAGTATCCAGCTTTGCTTTTCAAGCAGCAACTTACTGCATATGTGGAAAAGATTTATGGAATTGTTCGAGATAATTTGAAGAAGGACTTGTCGCCTTTGCTTACTTCTTGCATTCAGGCACCTAAAACATCAGAGCAAAGCCTGTCAGATGAACAGTCAACTGATAATAGTGCCCCGGCTGGTTCTTGGCAGAACATTATTGATTGCCTTAACAAATTTCTCAATATGATGAAAGAAAAACATGTGCCTCCTGTTCTAGTTCAGAAGATATCGACCCAGTATGCTGGTTCATCTTGGGATGAACTCAAACCTGTGAGGCAAGCAGTTGGATTCCTGGCTGAAATTGAGAAGACCACGATATCCTATGATGATCTCACTAACGATCTGTGTCCTATCCTGAGTGCTCATCAGCTTTACAAAATCTGTTTACTTTACGGGGATGGTTGTGACAGTGAACAATGCGTATCAACAGATGTCACTACAAGGTTGAAGCTTTTAATAACAGATGATACACAAGAAGACAGCGACTCCTTCATGTTGGAAGATAATTCAAGTATCCCATACTCAGTTGATGAGATTTCTCATTCCCTTCATGGAGATAACTCGTTAAAAATACAAGCGCCAGCAGAACTTCTTCAGAACTCAGCCTTCCAATTTTTACATTGA 4395 0.4157 MRNREPILVFREWRLDVLNYATSINFRVGTQVFVEDPEVAWIDGEIVETNGEEIKVKCASDKTVVVKASNVHPKDPEFPPSGVDDMTRLAYLHEPGVLQNLQIRYDNSEIYTYTGNILIAVNPFQRLPHLYGHDVMEKYKGAAIGELTPHPFAIADSAYRMMLNEETSQAILVSGESGAGKTESTKMLMHYLAFMGGRKESEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDHRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMICAAPEEDLKRFKLENPRTYHYLNQSNFFELDGLDESKEYLATRRAMEVVGINSDEQDAIFRVIAAILHLGNIEFQKGDEPDSSEPKDDQSRSHLKTTAELLMCDEKSLEDSLCKRVMVTRGEAITKWLDPNSAALSRDSLAKVVYSKLFDXSKCEELNWGSGYIRIREFQDKQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAEKLYQTYKDNKRFSKPKLSRTDFTICHYAGDVTYQTDFFLDKNKDYVVPEFEALLNASKCSFVSGLFPPPPEETSKSSKFSSIATQFKQQLQSLLETLNATEPHYIRCIKPNNLLKPRIFENTNVLQQLQCGGVMEAIRISCAGYPTRKQFDEFVKRFGILAPDALKECPDERTACVKLLGQVNLEDYQVGKTKVFLRAGQMAKLDAFRAEVLGRSAIIIQTVSIQAGMRCMAARNGLKCRRRTEASIVIQTHCRGYVAYLQLQRLREAALVIQCISRGQMARNELRKLQMAARETGALKAAKEKLEKEVEELNSSLQMEKKMMADVEQKNGKLQSALEETKEENSKLQSALEETKQENSKFQSALEEIKVENAKLQTSLEETRALLFQERQAAKNVGEPNSNTEEFPVIDNDLIKKLTTENEHLKELVKSLEKKVVDTERKSVESEGKLTQDEDAKSPSIQEHDAASQAVDLSSGLLEFPVGDNELNNKLAAENEHLKALVNSLEKKIDESNGLSEERLKQVTEAETKVIELKMAMQRLEEKLSDIETEDQILRQQALLSSSSRRMSGNLSFSNSQPSENGHGDANTSRKKFGTEADELRKSLVERQQESVETLLKCVAEADLGFSEGKPVAAYSIYKCFLHWKSFEAEKTSVFDRLIQLVGSAIEDQDNNDHMAYWLSNSSALLFILQQSLRPPSAQKPPPPATSFFGRISQSFRSSTAGTSLDTIRHVDAKYPALLFKQQLTAYVEKIYGIVRDNLKKDLSPLLTSCIQAPKTSEQSLSDEQSTDNSAPAGSWQNIIDCLNKFLNMMKEKHVPPVLVQKISTQYAGSSWDELKPVRQAVGFLAEIEKTTISYDDLTNDLCPILSAHQLYKICLLYGDGCDSEQCVSTDVTTRLKLLITDDTQEDSDSFMLEDNSSIPYSVDEISHSLHGDNSLKIQAPAELLQNSAFQFLH 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0472 1464 Coils Coil 925 952 - -
Alju06g0472 1464 Coils Coil 1033 1067 - -
Alju06g0472 1464 CDD MYSc_Myo11 95 708 IPR036018 -
Alju06g0472 1464 ProSiteProfiles IQ motif profile. 776 805 IPR000048 GO:0005515
Alju06g0472 1464 Gene3D - 271 329 - -
Alju06g0472 1464 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 27 76 IPR004009 GO:0003774|GO:0005524|GO:0016459
Alju06g0472 1464 PRINTS Myosin heavy chain signature 168 193 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju06g0472 1464 PRINTS Myosin heavy chain signature 215 242 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju06g0472 1464 PRINTS Myosin heavy chain signature 470 498 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju06g0472 1464 PRINTS Myosin heavy chain signature 111 130 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju06g0472 1464 SMART MYSc_2a 75 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju06g0472 1464 Gene3D Myosin VI head, motor domain, U50 subdomain 556 589 - -
Alju06g0472 1464 Gene3D Myosin VI head, motor domain, U50 subdomain 331 429 - -
Alju06g0472 1464 Gene3D - 451 611 - -
Alju06g0472 1464 Gene3D Kinesin motor domain 84 270 IPR036961 -
Alju06g0472 1464 Gene3D Kinesin motor domain 612 650 IPR036961 -
Alju06g0472 1464 Gene3D - 30 74 IPR008989 GO:0003774|GO:0005524|GO:0051015
Alju06g0472 1464 PANTHER MYOSIN 73 1374 - -
Alju06g0472 1464 MobiDBLite consensus disorder prediction 953 978 - -
Alju06g0472 1464 Coils Coil 799 896 - -
Alju06g0472 1464 MobiDBLite consensus disorder prediction 1076 1103 - -
Alju06g0472 1464 MobiDBLite consensus disorder prediction 953 971 - -
Alju06g0472 1464 Pfam Myosin head (motor domain) 452 708 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju06g0472 1464 Pfam Myosin head (motor domain) 83 429 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju06g0472 1464 Gene3D - 756 804 - -
Alju06g0472 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 805 IPR027417 -
Alju06g0472 1464 Gene3D - 654 755 - -
Alju06g0472 1464 Coils Coil 998 1025 - -
Alju06g0472 1464 ProSiteProfiles Myosin motor domain profile. 81 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju06g0472 1464 MobiDBLite consensus disorder prediction 1076 1094 - -
Alju06g0472 1464 FunFam Myosin heavy chain 271 326 - -
Alju06g0472 1464 SMART iq_5 775 797 IPR000048 GO:0005515
Alju06g0472 1464 SMART iq_5 752 774 IPR000048 GO:0005515
Alju06g0472 1464 ProSiteProfiles IQ motif profile. 753 779 IPR000048 GO:0005515
Alju06g0472 1464 ProSiteProfiles Dilute domain profile. 1166 1412 IPR002710 -
Alju06g0472 1464 Pfam IQ calmodulin-binding motif 777 797 IPR000048 GO:0005515
Alju06g0472 1464 Pfam IQ calmodulin-binding motif 755 769 IPR000048 GO:0005515
Alju06g0472 1464 FunFam unconventional myosin-Va 755 803 - -
Alju06g0472 1464 Pfam Myosin N-terminal SH3-like domain 29 71 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0472 Alju-ChrAlju06 3875318 3890514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0472 21 1463 Myosins gene family AT1G04600 53.029 0.0 1647