Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0450 ATGAGTTTGATGGGCCAATATGACTATGTTTTGCAGGCTTTGATAGGTCTCTTGAAAATTAAGATGTCTGGGAATTTCAATAAAAGGAGAGCGTTGGAAGACAGGTGTTCTGGTATTCTACTATTATTCACTTTATTTCTTTATACTACAGAAGGATTGAACACAGAGGGGCAATATCTGCTTGAACTGAAGAGTAGTCTTCATGATGAATCCAATCACTTGGCAAATTGGGAGTCAACTGATGAAACGCCTTGTGGATGGACGGGTGTAAATTGCACTTATGACTATAATCCAGTGGTCTGGTCCCTTGATTTGAGTTCAATGAATCTTTCTGGAACTATAAATCCTAGTGTTGGAGGTCTCACACATCTAACTTATCTCAATCTTGCCTACAATGGGCTGATGGGAAGTATACCCAATGAAATTGGAAATTGCTCGAGCTTGGAATTTCTTTGTTTCAACAATAATCGATTCAGTGGACAAATTCCTGCTGAATTGGGAAAGCTGTCCCTTTTGAGAAGTTTGAATATTTGCAACAACTTTCTCTCTGGTTCTCTGCCAGAGGAACTGGGAAACCTGTCTTCACTGGTTGAGCTTGTAGTCTTCACAAACAATTTCACCGGTCCCCTGCCTCGTTCTATTGGAAATCTAAAGAGTCTCACGACTTTGAGAGCTGGTGGAAATGGATTGTCTGGTAGCTTGCCAAGTGAGATTGGTGGGTGTACGAGCATGGAGTTTCTTGGCCTTGCTCAAAATCAGATAGGAGGAGAACTACCAACGGAGATTGGGATGCTTCAGAACTTAAGAGAACTTCTTTTATGGAATAACCAATTATCAGGGCTTATTCCTAAAGAGATTGGGAATTGTACCAGCCTTGAAACTCTTGCTTTATATGGAAATGCTCTTGTTGGATCTATACCTGAGGAGATTGGGAATCTCAACTCTCTGGGGAGGTTGTACCTTTACAGAAATAAGTTGAATGGAACAATTCCAAGGACAATTGGGAATCTTTCTCTGGCATTAGAAATTGATTTCTCAGAAAACTCTTTGATGGGTGATATTCCTTCTGAGATCAGCAAAATAAGTGGTCTCCAGTTGCTCTTTCTCTTTGAGAACCAGCTATCAGGTGTTATACCCAATGAGTTTAGTAGCTTGAGGAATCTGACAAGGCTAGACCTGTCCATTAATAATCTCACAGGTTCTGTTCCATTGGGGTTCCAGTACTTGACTCGAATGACTCAGTTGCAACTTAATGACAACTCTCTAAGTGGGAATATTCCTCAAAGCCTTGGACTTTATAGTCCTCTATGGGTGGTTGATTTTTCTAACAATGAATTGACAGGAATAATACCTCCTCATCTATGTCGAAATTCTAGATTGATGTTGTTGAATCTGGCTTCTAATCGGCTGTATGGAAATATACCAACAGGCATCCTGAACTGTGAAACATTGGCACTGCTTCTGTTGGTTGAGAATAGTCTTACTGGTGGCTTTCCTTCAGAACTGTGCCAACTAGTGAACCTTACTGCCGTTGAGCTGAACCAGAACAGGTTCAGTGGTCCTATTTCTCCTGAGATTGGGCGGTGCCACAAGTTGCAGAGGCTTCATATTGCTAACAACTACTTCACATTAGAGTTGCCTCAAGAACTAGGAAACCTTTCTCAGTTAGTGACCTTCAATGTGTCGTCCAATTCTTTCACTGGACCAATCCCACCTGAAATTGTTAGATGCAAGAAGCTGCAGCGAATTGATCTCAGCCACAACAGCTTTACTGGTTCCCTACCAGATGAGCTTGGAACACTGTCGCAGTTGGAGATTCTCAAGGTCTCAGATAATAAACTTACTGGGCATATTCCTCCAACATTAGGTAATCTGCCTCGTTTGACTGCATTGCAGATGGGTGGCAATTTACTTTCTGGGGAAATACCTCCTGATCTGGGTAATCTCACAAGCTTACAGATTGCATTGAATCTCAGTTACAATAACCTTACTGGAAGTATACCTGATAAGCTTGGCAATCTCTATATGCTTGAGTTTCTCCTTCTCAATAATAATAATCTGAGTGGTGAAATTCCCAGCACATTTGAAAACCTTTCAAGTTTGATGGGTTGTAATTTCTCATACAACAATCTTTCTGGACCTATGCCTTCCATTCCACTATTTGAAAATATGGCGATTAGCAGCTTTATTGGTAACAATGGCCTTTGTGGTGCTCCTCTGCTTGGCTGCAACATTAATCCATCTTCTCTTTCTGATCCTCCTATGAATAATGTTAATTCTTCTCGCACCAAGATCATCATTATTATTGCAACAGTCATTGGCGGTATTTCTCTCATTCTAATAGTATTCATTTTATATTTAATGAGACGTTCTCCTGAGCCTATTTCTTCATTGAGGGATTCTGAGATTCCCTCCTCAGATTCAGATGTCTATTTTCCTCCAAAAGATGGCTTCACCTTCCATGATCTACTTGAAGCTACCAACAACTTTCATGACAGTTATGTTATTGGAAGAGGGGCTTGTGGAACAGTTTATAAGGCGGTGATGCTATCTGGGAAGACCATTGCTGTTAAAAGGTTGGCATCCAACAGGGAAGGGAACAACATCGAGAATAGCTTCCGGGCTGAGATATTAACTCTTGGAAAGATAAGGCATCGAAATATAGTGAAGTTGTATGGATTTTGCTATCACCAAGGTAGCAATCTGCTACTATATGAGTACATGGCAAGGGGTAGCCTAGGGGAGCAACTACATGGATTTACAAGTAATTTGGAATGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCAGAGGGTCTTGCTTACTTGCATCATGACTGCAAACCAAAGATCATTCACCGTGATATAAAATCAAACAACATTTTACTTGATGAAAATTTTGAGGCTCATGTGGGTGACTTTGGTTTGGCAAAAGTCATTGACATGCCTCAATCAAAGTCAATGTCAGCAGTTGCTGGATCATATGGTTATATTGCTCCTGAATATGCATACACCATGAAGGTCACTGAGAAGTGTGACATCTACAGCTATGGAGTTGTGCTGTTGGAGTTGCTAACTGGAAGAACTCCGGTTCAGCCGCTAGAGCAAGGAGGCGATCTGGTGACATGGGTCAAAAACTATATCCGGAGCCATAATAACACACTGTCCTCTGGTGTGCTTGACGATCGTCTCAATCTCCAATATCAAACCACTGTGAACCACATGCTCACTGTCCTCAAAATTGCTTTGCTCTGCACAAACATGACCCCTACCGATCGCCCATCGATGCGCCAAGTCGTGTGGATGCTCATAGAATCCAACGAGCGAGAAGGAAACTTGGCCAATATTTCTCCATCTCGGTATGAGGATCCCACTTCTAAAGAAGATGATGAGCAAACGAGTACATGA 3408 0.4164 MSLMGQYDYVLQALIGLLKIKMSGNFNKRRALEDRCSGILLLFTLFLYTTEGLNTEGQYLLELKSSLHDESNHLANWESTDETPCGWTGVNCTYDYNPVVWSLDLSSMNLSGTINPSVGGLTHLTYLNLAYNGLMGSIPNEIGNCSSLEFLCFNNNRFSGQIPAELGKLSLLRSLNICNNFLSGSLPEELGNLSSLVELVVFTNNFTGPLPRSIGNLKSLTTLRAGGNGLSGSLPSEIGGCTSMEFLGLAQNQIGGELPTEIGMLQNLRELLLWNNQLSGLIPKEIGNCTSLETLALYGNALVGSIPEEIGNLNSLGRLYLYRNKLNGTIPRTIGNLSLALEIDFSENSLMGDIPSEISKISGLQLLFLFENQLSGVIPNEFSSLRNLTRLDLSINNLTGSVPLGFQYLTRMTQLQLNDNSLSGNIPQSLGLYSPLWVVDFSNNELTGIIPPHLCRNSRLMLLNLASNRLYGNIPTGILNCETLALLLLVENSLTGGFPSELCQLVNLTAVELNQNRFSGPISPEIGRCHKLQRLHIANNYFTLELPQELGNLSQLVTFNVSSNSFTGPIPPEIVRCKKLQRIDLSHNSFTGSLPDELGTLSQLEILKVSDNKLTGHIPPTLGNLPRLTALQMGGNLLSGEIPPDLGNLTSLQIALNLSYNNLTGSIPDKLGNLYMLEFLLLNNNNLSGEIPSTFENLSSLMGCNFSYNNLSGPMPSIPLFENMAISSFIGNNGLCGAPLLGCNINPSSLSDPPMNNVNSSRTKIIIIIATVIGGISLILIVFILYLMRRSPEPISSLRDSEIPSSDSDVYFPPKDGFTFHDLLEATNNFHDSYVIGRGACGTVYKAVMLSGKTIAVKRLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEYMARGSLGEQLHGFTSNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVKNYIRSHNNTLSSGVLDDRLNLQYQTTVNHMLTVLKIALLCTNMTPTDRPSMRQVVWMLIESNEREGNLANISPSRYEDPTSKEDDEQTST 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0450 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 951 963 IPR008271 GO:0004672|GO:0006468
Alju06g0450 1135 SMART LRR_typ_2 361 384 IPR003591 -
Alju06g0450 1135 SMART LRR_typ_2 553 577 IPR003591 -
Alju06g0450 1135 SMART LRR_typ_2 265 289 IPR003591 -
Alju06g0450 1135 SMART LRR_typ_2 601 624 IPR003591 -
Alju06g0450 1135 SMART LRR_typ_2 313 337 IPR003591 -
Alju06g0450 1135 SMART LRR_typ_2 625 649 IPR003591 -
Alju06g0450 1135 SMART LRR_typ_2 121 145 IPR003591 -
Alju06g0450 1135 SMART LRR_typ_2 169 193 IPR003591 -
Alju06g0450 1135 SMART LRR_typ_2 674 697 IPR003591 -
Alju06g0450 1135 SMART LRR_typ_2 505 529 IPR003591 -
Alju06g0450 1135 SMART LRR_typ_2 217 241 IPR003591 -
Alju06g0450 1135 SMART LRR_typ_2 385 408 IPR003591 -
Alju06g0450 1135 SUPERFAMILY Protein kinase-like (PK-like) 805 1103 IPR011009 -
Alju06g0450 1135 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 908 1119 - -
Alju06g0450 1135 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 796 907 - -
Alju06g0450 1135 SUPERFAMILY RNI-like 342 717 - -
Alju06g0450 1135 Gene3D Ribonuclease Inhibitor 206 304 IPR032675 -
Alju06g0450 1135 Gene3D Ribonuclease Inhibitor 409 747 IPR032675 -
Alju06g0450 1135 Gene3D Phosphorylase Kinase; domain 1 799 907 - -
Alju06g0450 1135 ProSiteProfiles Protein kinase domain profile. 830 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0450 1135 Gene3D Ribonuclease Inhibitor 52 205 IPR032675 -
Alju06g0450 1135 MobiDBLite consensus disorder prediction 1112 1135 - -
Alju06g0450 1135 Pfam Leucine rich repeat 267 326 IPR001611 GO:0005515
Alju06g0450 1135 Pfam Leucine rich repeat 579 638 IPR001611 GO:0005515
Alju06g0450 1135 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 52 211 - -
Alju06g0450 1135 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 433 746 - -
Alju06g0450 1135 Gene3D Ribonuclease Inhibitor 305 408 IPR032675 -
Alju06g0450 1135 Gene3D Transferase(Phosphotransferase) domain 1 908 1121 - -
Alju06g0450 1135 Pfam Leucine rich repeat N-terminal domain 54 92 IPR013210 -
Alju06g0450 1135 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 212 304 - -
Alju06g0450 1135 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 261 341 - -
Alju06g0450 1135 Pfam Protein kinase domain 831 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0450 1135 SMART serkin_6 830 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0450 1135 SUPERFAMILY L domain-like 55 355 - -
Alju06g0450 1135 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 305 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0450 Alju-ChrAlju06 3683534 3688811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0450 75 1103 Receptor kinase-like Gene Family AT1G73080 37.465 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju06g0450 Pkinase 4.5e-48 CL0016