Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0449 ATGAGTCGTGGAGGTTCATCAAGATGGTGCCCAACACAGGAACAACTATTGATTCTTGAGGAGATGTACAGAGTTGGGATCAGAACTCCAAATGCGTCCCAGATTCAACACATCACAGCTCAGCTTTCTTTCTATGGCAAGATAGAGGGCAAGAACGTTTTCTATTGGTTTCAGAATCACAAGGCTAGGGACAGACAGAAACTCCGCAGAAGATTGAACAAGCAACTTCAGTTGCAGCAGCAGCAGCAGCAACAACACCACCAGCTCTGTAACTATTACCTTCATCATCAGCTTCGTCCGATGAACCACAACTATAATAATCACTATTATTCTCATCACTTCCCCATGGATCATCAGTCTCTTGTTACCGCCTCTTCATCCTCCCAACAACGTTTCTTTTACAACTCCCTTGCCTCGTTTCCACAGGGAGGAGCTGGAGAAGCATCAAAACAAGGCATAGATTACAAGTGGAAAATTGAGAAAACAGAAGGAGGAGTGATGGAGAAGACAATGAAGCAAGATTGGAGGACGAAGACGGTGATGGAAGTAAGTGCAGGAACAGCCAAACGTAGTGAAGCAAGTTTAAAGATTCCAAGAAGAACGAAGGATGAAGATCTGGGAGAGCATCTTCTTCATCGTAATGAAACCTATGAGTTCACATTCAGGACTAATTTCTGGGGCACCACTCTCTACTTCTGCGCCTTCTCATGGCCTGGTGCTTGTCACTGGTTCAGTACTTTCACAATGAAGAGGGATCATGCCCAGTGCACCCTCTGCATCTGGCAAATCAGACAGGACAAACCCTGCAGAGGCTCAGCAGGAAAAGTCATGTCTTTGATGATTGCTTCAACTGAAGTGCAACTTCATGCTGATTAG 876 0.4521 MSRGGSSRWCPTQEQLLILEEMYRVGIRTPNASQIQHITAQLSFYGKIEGKNVFYWFQNHKARDRQKLRRRLNKQLQLQQQQQQQHHQLCNYYLHHQLRPMNHNYNNHYYSHHFPMDHQSLVTASSSSQQRFFYNSLASFPQGGAGEASKQGIDYKWKIEKTEGGVMEKTMKQDWRTKTVMEVSAGTAKRSEASLKIPRRTKDEDLGEHLLHRNETYEFTFRTNFWGTTLYFCAFSWPGACHWFSTFTMKRDHAQCTLCIWQIRQDKPCRGSAGKVMSLMIASTEVQLHAD 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0449 291 Coils Coil 65 85 - -
Alju06g0449 291 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 145 IPR044555 GO:0003700|GO:0099402
Alju06g0449 291 Pfam Plant self-incompatibility protein S1 193 272 IPR010264 -
Alju06g0449 291 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Alju06g0449 291 SUPERFAMILY Homeodomain-like 7 67 IPR009057 -
Alju06g0449 291 CDD homeodomain 8 67 IPR001356 GO:0003677
Alju06g0449 291 SMART HOX_1 4 71 IPR001356 GO:0003677
Alju06g0449 291 Gene3D - 6 74 - -
Alju06g0449 291 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Alju06g0449 291 FunFam WUSCHEL-related homeobox 4 6 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0449 Alju-ChrAlju06 3676142 3679726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0449 1 74 Wox Gene Family AT2G28610 79.730 9.67e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju06g0449 Self-incomp_S1 7.6e-18 No_clan