Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0442 ATGAGTCAAATCTGTGCGTTTTTCTTCTCTGTCACCAACACTATCTTATGTTGTTGTACCCTTGCTTTCTCTTATAACCATGAAGCTTATTTGCTTTATTCATGGCTTCACAGCTCACCCTCTTCACGTTTCCCTAACTGGAACATTAGTGACTCAAACCCATGTAACTGGACCTCCATAACTTGTTCTCCTCAAGGTTTTGTCACAGAAATTAATATTGTCTCTGTCCCTCTTCACTTGCCTCTACCTTACAATGTCTCATCCTTTCGCTTCCTTACGAAACTTGTCATGTCAGATGCAAATCTTACCGGAAGTATCACTTCTGATATTGGTGCTTGTTCTTCCCTTACTGTCATTGATCTTAGCCATAATAGTCTCACTGGTTCAATTCCTTTGAGTGTTGGGAATTTGCCAAATCTCAAGACTTTGGCCTTAAACTCCAACTTCCTCAGTGGAGAAATCCCAAATGAGCTAAGTAATTGCATTGGCCTAGAATCTATCATCCTTTCAAATAATCAGCTAAGTGGAAAAATCCCACCTTTGCTGGGAAAATTATCAAAACTTGAGATTTTTAGAGCAGGAAGGAACAGACTCATTACTGGGAATATACCACATGGCCTGGGAAATTGCACTAATTTGATTTCTTTGGGGTTGACTGAAACCAGTATATCAGGCTCTTTGCCTGCTTCATTGGGTAGGCTTAAAAAGCTTCAAAGGTTGTCACTTTGTGATACTATGCTTTCTGGTGAGATTCCATCAGCGATAGGTGACTGCTCTGAGCTTGTTGAGTTGAGACTATGCACAAATAAACTATCAGGTTCTGTTCCATCTGATTTAGGGAAGCTGCAAAAGCTGCAAATTTTGAATTTATGGGATAATTTTATTACTGGGGCTATTCCTGAAGAGATTGGTAACTGTACAAGCTTGACAACACTTGAGCTTTCTATGAATTCTCTATCTGGGGCTATCCCTTTGTCTGTAGGTAAGCTTGTGAAGCTTGAAAAGTTTTTGGTTGCTCAAAACAATATCTCTGGTTTTATACCTTCAACTCTTTCAAATGCCTCAAACCTGCAAAGATTGGAACTTTACATGAACCACATCTCAGGGTTGATCCCACCTGAGCTTGGGAGATTGCAAAAGCTCACACAGTTCTATGCTTGGGGCAACCAGCTTGAAGGAACCATACCTTCTACTTTAGCCAACCTCAGTAACCTCCAAAAGCTTGATTTGTCTTGGAACTCATTTATTGGAAGCATTCCAAAAGGCCTGTTTTTGCTACAAAACCTCACAGAGTTTGAGTTAATTTTCACTGATATTTCAGGTGCAATTCCACCTGAGATAGGAAGTTGCAGCTCTCTTGAAAGGCTGAGTCTTAGAAACAATAGAATTTATGGTGAGATTCCAAAGACAATTGGTGGTTTAAAAAACTTAATCTTTTGTGATATCTCCGATAACCGCCTTTACGGGTCATTGCCGGAGGAGATTGGTGGTTGCTCAAGGCTGGAAATGATAAACCTTAGCAACAATGACTTAGAAGGTCCACTTCCTGAGTCATTATCAACACTACCCAATCTTTCAATTTTGAATGCATCTAATAATAAATTTGAAGGTCAAATACCTACAAGCTTAGGTCATGATCTTTCTTCCCTAATTGATCTCCTACTTAGCAGAAACAAGTTCTCTGGAACCATTCCTCAATCACTTGGTCTATGTTCAAAGCTCCAATTGCTTGATCTTAGTAGCAATGAACTCACTGGAAGCATACCAAAAGAGTTAGGTGACATAAAAACTCTTGCAGTTGTTCTTAACCTTAGTCACAACTCTCTTAAAGGACCACTTCCTTCCGAAATCTCTAAACTAAACATGCTCTCAGTGATTGACATTTCACATAACAATTTGGAAGGAACTTTGCAGCCTCTTTCTCACCTTGCAAGTCTTGTTTCTCTCAATATCACTTACAATAACTTCACTGGCCATCTTCCTGACACTAGGATTTTTAGACACTTGTCACCAGAAGAAATAATGGGAAACAGGGGTCTCTGTTCTAGGATTCAGGATTCTTGCTTCTCAAATGGTTCACGCAGGAAACAATTGACTGAAAACATGAACTCAACCATTCTTAAACTGGTCATTGGGTTGCTGGTAGTGTTGATAATGATATTTGTTGTTATAATAATCATTTCAGTTAAAAGGGCAAGAACTATCAGAGACAATAATAATCATTCAGAGATGGGAAACAAATGGACATGGCAATTCACTCCATTTCAGAGGTTAAATTTCTCAGTTGAGCAGGTACTTAGAAGCTTAAAAGATGAAAATATAATAGGAAAAGGAAGCTCAGGAGTTGTTCATCGTGTCGATATCGGTAATAATGAAGCCATAGCCGTGAAGAAATTGTGGCCAGCTCCAATGGTTTCAAGTGATATTCGAGCAGCCAATAATGATGACAAGAGAGGAGCACGCAACTCTTTCTCGAGGGAGCTGAAAATCCTCGGCACAATCCGACATAGGAACATTGTGAGACTCCTAGGATGCTGTTGGAGTGACAACATGAGATTGCTTATGTACGAATATATGCCAAATGGGAGCTTAGGAAGTCTACTTCACGAGAGGGATGAGAATTCTTGTTTGGAATGGGGAATTAGATACAAAATCTTGTTAGGTGCTGCACTAGGCCTTGAATATCTTCACCATGATAGTGAACCTCCAATAGTCCATAGAGACATCAAACCCAGTAACATCCTTATTGGCCCTGAATTTAATGCTTGCATTGCTGACTTTGGCTTGGCTAAGTTTGTAGATGATTGTGGTTTTGGCAAGTCCTCCAATATAGTTGCTGGTTCTTGGGGATATATTGCTCCTGAGTATGGCTACATGATGAAGATTACAGAGAAGAGTGATGTTTATAGTTTTGGAGTAGTGATGCTGGAGGTGCTAACGAGTAAGAAACCGATTGATCCAAGCATACCAGAAGGGTTACACATTGCAGAATGGGTGAGGGAAAAGAGGGGACAAGTAGCAGAAGTCCTAGACCCAGAATTACAATTTGCAGCAGAATCAGAAATAGAAGAAATGAAGGAAGCAATAGGGATTGCCCTATTGTGCTTAAGTTATGCCCCAAATCAAAGACCTACAATGAGGGATGTGGCAAGCATGATCAAGGAAATTAAACACGTGAGTGAGGCTGAATACGCTGATTTTGATACCCTCTTGAAGGACTCTCCTTCACCACTTACTGGGCCTTCTGCTGCACAATCTTCACAGCCACCAGCTGCAACACCAAGAAGCTTCTACTTTAAAAGCAACAAACCAAGCCCCTCCGCATCCTCCCCAAGATGTTCGTCTTTTTCCATTGTTGAATTGGGTTAA 3369 0.4034 MSQICAFFFSVTNTILCCCTLAFSYNHEAYLLYSWLHSSPSSRFPNWNISDSNPCNWTSITCSPQGFVTEINIVSVPLHLPLPYNVSSFRFLTKLVMSDANLTGSITSDIGACSSLTVIDLSHNSLTGSIPLSVGNLPNLKTLALNSNFLSGEIPNELSNCIGLESIILSNNQLSGKIPPLLGKLSKLEIFRAGRNRLITGNIPHGLGNCTNLISLGLTETSISGSLPASLGRLKKLQRLSLCDTMLSGEIPSAIGDCSELVELRLCTNKLSGSVPSDLGKLQKLQILNLWDNFITGAIPEEIGNCTSLTTLELSMNSLSGAIPLSVGKLVKLEKFLVAQNNISGFIPSTLSNASNLQRLELYMNHISGLIPPELGRLQKLTQFYAWGNQLEGTIPSTLANLSNLQKLDLSWNSFIGSIPKGLFLLQNLTEFELIFTDISGAIPPEIGSCSSLERLSLRNNRIYGEIPKTIGGLKNLIFCDISDNRLYGSLPEEIGGCSRLEMINLSNNDLEGPLPESLSTLPNLSILNASNNKFEGQIPTSLGHDLSSLIDLLLSRNKFSGTIPQSLGLCSKLQLLDLSSNELTGSIPKELGDIKTLAVVLNLSHNSLKGPLPSEISKLNMLSVIDISHNNLEGTLQPLSHLASLVSLNITYNNFTGHLPDTRIFRHLSPEEIMGNRGLCSRIQDSCFSNGSRRKQLTENMNSTILKLVIGLLVVLIMIFVVIIIISVKRARTIRDNNNHSEMGNKWTWQFTPFQRLNFSVEQVLRSLKDENIIGKGSSGVVHRVDIGNNEAIAVKKLWPAPMVSSDIRAANNDDKRGARNSFSRELKILGTIRHRNIVRLLGCCWSDNMRLLMYEYMPNGSLGSLLHERDENSCLEWGIRYKILLGAALGLEYLHHDSEPPIVHRDIKPSNILIGPEFNACIADFGLAKFVDDCGFGKSSNIVAGSWGYIAPEYGYMMKITEKSDVYSFGVVMLEVLTSKKPIDPSIPEGLHIAEWVREKRGQVAEVLDPELQFAAESEIEEMKEAIGIALLCLSYAPNQRPTMRDVASMIKEIKHVSEAEYADFDTLLKDSPSPLTGPSAAQSSQPPAATPRSFYFKSNKPSPSASSPRCSSFSIVELG 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0442 1122 MobiDBLite consensus disorder prediction 1075 1116 - -
Alju06g0442 1122 ProSitePatterns Protein kinases ATP-binding region signature. 775 798 IPR017441 GO:0005524
Alju06g0442 1122 SUPERFAMILY RNI-like 347 661 - -
Alju06g0442 1122 ProSiteProfiles Leucine-rich repeat profile. 404 426 IPR001611 GO:0005515
Alju06g0442 1122 FunFam Putative LRR receptor-like serine/threonine-protein kinase 602 686 - -
Alju06g0442 1122 CDD STKc_IRAK 775 1056 - -
Alju06g0442 1122 Pfam Protein kinase domain 771 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0442 1122 SMART serkin_6 769 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0442 1122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 904 916 IPR008271 GO:0004672|GO:0006468
Alju06g0442 1122 ProSiteProfiles Protein kinase domain profile. 769 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0442 1122 Gene3D Phosphorylase Kinase; domain 1 743 858 - -
Alju06g0442 1122 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 859 1071 - -
Alju06g0442 1122 Pfam Leucine rich repeat N-terminal domain 37 63 IPR013210 -
Alju06g0442 1122 Gene3D Ribonuclease Inhibitor 30 172 IPR032675 -
Alju06g0442 1122 Gene3D Transferase(Phosphotransferase) domain 1 859 1072 - -
Alju06g0442 1122 SMART LRR_typ_2 450 474 IPR003591 -
Alju06g0442 1122 SMART LRR_typ_2 402 426 IPR003591 -
Alju06g0442 1122 SMART LRR_typ_2 547 571 IPR003591 -
Alju06g0442 1122 SMART LRR_typ_2 643 668 IPR003591 -
Alju06g0442 1122 SMART LRR_typ_2 282 306 IPR003591 -
Alju06g0442 1122 SMART LRR_typ_2 330 353 IPR003591 -
Alju06g0442 1122 SMART LRR_typ_2 137 161 IPR003591 -
Alju06g0442 1122 SMART LRR_typ_2 185 210 IPR003591 -
Alju06g0442 1122 SMART LRR_typ_2 522 546 IPR003591 -
Alju06g0442 1122 Gene3D Ribonuclease Inhibitor 357 696 IPR032675 -
Alju06g0442 1122 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 340 1054 - -
Alju06g0442 1122 SUPERFAMILY L domain-like 35 391 - -
Alju06g0442 1122 FunFam Nuclear pore complex protein NUP107 25 168 - -
Alju06g0442 1122 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 197 420 - -
Alju06g0442 1122 Pfam Leucine Rich Repeat 115 137 IPR001611 GO:0005515
Alju06g0442 1122 Pfam Leucine Rich Repeat 404 422 IPR001611 GO:0005515
Alju06g0442 1122 Gene3D Ribonuclease Inhibitor 278 356 IPR032675 -
Alju06g0442 1122 MobiDBLite consensus disorder prediction 1074 1122 - -
Alju06g0442 1122 Gene3D Ribonuclease Inhibitor 173 277 IPR032675 -
Alju06g0442 1122 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 421 515 - -
Alju06g0442 1122 FunFam Leucine-rich repeat receptor protein kinase EMS1 516 601 - -
Alju06g0442 1122 SUPERFAMILY Protein kinase-like (PK-like) 743 1053 IPR011009 -
Alju06g0442 1122 Pfam Leucine rich repeat 452 511 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0442 Alju-ChrAlju06 3626733 3630620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0442 23 1099 Receptor kinase-like Gene Family AT5G56040 42.883 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju06g0442 Pkinase 7.6e-41 CL0016