Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0417 ATGCTGCAGCCATGCGAACTCTTGATCATACTGTCATGTTTCGCTTGTTTGCTTGTATTCAGAGATGATTCCCTCTGCGCCAAAGCTCTTCGAACTCGCTTGCTGATAAAAATTTCTCTCTTCACCGTCGACTGTCTTCCATCTCAAATTCAGATGGACTTGGATATGGACATTCCACTTCCAGAAGAGCTGGAATTGCTGGAATCCAATGCTCGTCTTCTCGAAGACTACCCAGACCTGGAGCCACCGGAACCCTACCCATACGAAGACCAAGAAGCGCCACCAGCAGCACAACCACCACCATCTCCAGATCTTCAGTTCGACTCTGAAATCCAAGTCATCGGCCAAAAGCGATCGAGGTCGGTTAGTCCGAATGGATCACTTTCAGAGGCTGCCCAGCTGTCAGAGGAGAAAAGATGCAGGACTGACGAGTCGGCACGGGCGACTGATGAGGACTGGCTCCGTTACTCGCCGCCCAAGGGTAGCGAGTCTGTAGTGGCAGAGCAAGCAAGCTTTGTGAGGGAGAAGATGTTATCCAGGTATGCGTCGGAAATCGATGGAGAGTGTATACCGATCACTGCACCCAACGGCGGCAGGGTTTATGCGAGGCTAGATAGGTTGGAAGGGGAGGAACGGCTGAAGAAACTGGATGTGAGAGCAAATTCTGATGGTCTTATATTAGAACCCATCAATATTTTGTTTGAGAAATTGGATCAAGAGGCTTTCACTAAGACATTGGAAGCTAGTTCTGAATGCCAAAATGTTCCGGATGTTCCTGAAACACCAATTGTCCATGAACAACTTTGGGTAGATAAATATACCCCAAATTCGTTCACTGAGCTTCTTAGTGATGAACATACAAATCGTGAGGTACTCCTGTGGTTGAAGCAATGGGACTCTAGTGTATTTGGATCTGAGATTTGCAGTACATCAGATGAAGTTTTGTCTGCTTTGAAACGACATTCTACTGTTGTCCAAAATCAGAAACCTTTAGATTCAAAATTTCAAAGAACGAATGGAGGCCCCAAATGGAGTAACAATAGATATAGAAATTCTAGTAGTATGGATGAAAGCGGAAATTCAAAGAGTTTTCAGGATATATTGACTAGGAAAGTAAAGCATACTGGTCCACCAGAACAGAAGATTCTTTTGCTTTGTGGTCCTCCGGGTCTTGGAAAAACTACACTTGCACATGTAGCTGCTAGACATTGTGGATATCACGTGCTGGAGGTTAATGCTAGTGATGATCGTAGTACAGCAACGATTGAGTCTAAGATCCTTAACGTGGTTGAGATGAACTCTATCATGTCTGATTCAAGACCACAGTGCCTGGTGGTGGATGAAATTGATGGGGCACTATCAGATGGAAAGGGTGCTGTGGAGGTTCTTTTAAAGATGGTTTCTGTTGAAAAGAAGTCTGATGCGGGACAGGAAAATTTGGTGAAAGAGCAATCAGGAAGGAGATCCTCAAAGAAGGGACATAAGAAAGCATCACTGTCAAGACCTGTAATTTGCATTTGCAATGACCTATATGCTCCCGCCTTGAGACCATTGCGTCAGGTAGCGAAGGTTCACATTTTTGTTCAACCAACAGTTAGTCGTGTGGTAAGCAGGCTCAAATATATATGTAACAAGGAGGGGATGAAAGCTAATGCCATTGCACTTACTGCCCTAGCAGAATATACAGAATGTGATATACGATCATGCTTAAATACCCTCCAATTTCTCAACAAGAAGAAAGAAGCCCTCAATGTGTTTGATATTGGTTCTCAAGTGGTTGGCCGGAAAGACATGTCAAAGAATGTTCTGGACATTTGGAAGGAGGTTTTTCAAAGGAAAAAAACAAAGGCAGAAAGAAAGTCTCACAACAGGAAGCCTTTTGAAGTTAACTCCTTGTACTCCCTTGTATCAAGCCGTGGTGATTATGACTTGATTCTTGATGGAATTCATGAAAACGTTTTACAGCTCAATTATCATGACCCAGTGATGCAGAAAACTGTCAAGTGCTTGAATAGTCTTGGAGTTTCTGATCTACTGCATCAATATATCATGCGTACACAACGAATTCCTCTTCAGGTTTATTTGCCACCTGCAGCAATTACTGTACATCGACTGGTAGCTCAAATTCAGAAGCCAAACATCGAATGGCCAAGGTCCTACCAAAGGCATCGAACGATGATGGCAGAAAAGATGGACATTTTGAATTCTTGGCACTACAAAATTCCACCATATATCGCTAGGAACTTATCAGCTAGTTCCTTTGTAGAAGACTTAATTTCTCCATTATTACATATTCTGTCCCCTCCGACTATAAAACCGGTGGCATTACAATTACTGTCTGATAAAGAGAAAAATTATCTTGCTCAATTAGTTAGCACAATGGTATCTTACTCTGTAACATATAAAAACATGAAATCAGATATGGTGCCTAATAGCCTGAGACATGAAGTAGCGGATCACTTGACATTATCATTTGATCCCCCAATCTGTGACTTCATCAATTTTAAGGATTATACCTCAAAGCATTATGTGCTTGCTCCAGCCGTCAAGCAGATTCTTGTGCATGAGGTTGAAAAGCAAAAGATCTTGCAAGTTAGTATCGATAGGCCCTTAGGAAATGGAAGTAGCAGTGGAAGGCCTGAATTCATTGAGGCTGGAACTAGCAATGCCCAATCATCCAAAATCAACCACGCAGATGCAATTTCTGTTAAAAACATTCAAAACGAAAGTAATGTCACAAAAGGAAGGAAAAATAATGCAAATGCCACCATAGTTTCACAGAATTTGCATCCTAGTAAAGGGGCAGCGGACAAAATGAAATTGCAAAACACAGGAAGAATGAGAATGCCGTCCAGCGGTTCCTTCTTTGACAGGTTTAGAAAATTGAATAATAAAGGTTTTCAAAGTGATGATAGAACTGAACAGAAAGAAGCAACCTTGGAGAAAGCTCTACACCCATTACTGTTCAAATTTAACGAGGGTTTTACGAATGCAGTCAAGAGGCCCGTTCGTATTCGTGAATTTCTACTGTGA 3033 0.4224 MLQPCELLIILSCFACLLVFRDDSLCAKALRTRLLIKISLFTVDCLPSQIQMDLDMDIPLPEELELLESNARLLEDYPDLEPPEPYPYEDQEAPPAAQPPPSPDLQFDSEIQVIGQKRSRSVSPNGSLSEAAQLSEEKRCRTDESARATDEDWLRYSPPKGSESVVAEQASFVREKMLSRYASEIDGECIPITAPNGGRVYARLDRLEGEERLKKLDVRANSDGLILEPINILFEKLDQEAFTKTLEASSECQNVPDVPETPIVHEQLWVDKYTPNSFTELLSDEHTNREVLLWLKQWDSSVFGSEICSTSDEVLSALKRHSTVVQNQKPLDSKFQRTNGGPKWSNNRYRNSSSMDESGNSKSFQDILTRKVKHTGPPEQKILLLCGPPGLGKTTLAHVAARHCGYHVLEVNASDDRSTATIESKILNVVEMNSIMSDSRPQCLVVDEIDGALSDGKGAVEVLLKMVSVEKKSDAGQENLVKEQSGRRSSKKGHKKASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVSRLKYICNKEGMKANAIALTALAEYTECDIRSCLNTLQFLNKKKEALNVFDIGSQVVGRKDMSKNVLDIWKEVFQRKKTKAERKSHNRKPFEVNSLYSLVSSRGDYDLILDGIHENVLQLNYHDPVMQKTVKCLNSLGVSDLLHQYIMRTQRIPLQVYLPPAAITVHRLVAQIQKPNIEWPRSYQRHRTMMAEKMDILNSWHYKIPPYIARNLSASSFVEDLISPLLHILSPPTIKPVALQLLSDKEKNYLAQLVSTMVSYSVTYKNMKSDMVPNSLRHEVADHLTLSFDPPICDFINFKDYTSKHYVLAPAVKQILVHEVEKQKILQVSIDRPLGNGSSSGRPEFIEAGTSNAQSSKINHADAISVKNIQNESNVTKGRKNNANATIVSQNLHPSKGAADKMKLQNTGRMRMPSSGSFFDRFRKLNNKGFQSDDRTEQKEATLEKALHPLLFKFNEGFTNAVKRPVRIREFLL 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0417 1010 MobiDBLite consensus disorder prediction 87 102 - -
Alju06g0417 1010 CDD AAA 365 468 - -
Alju06g0417 1010 MobiDBLite consensus disorder prediction 76 146 - -
Alju06g0417 1010 MobiDBLite consensus disorder prediction 112 132 - -
Alju06g0417 1010 Gene3D - 266 528 IPR027417 -
Alju06g0417 1010 Pfam ATPase family associated with various cellular activities (AAA) 383 509 IPR003959 GO:0005524|GO:0016887
Alju06g0417 1010 SMART AAA_5 379 533 IPR003593 GO:0016887
Alju06g0417 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 583 IPR027417 -
Alju06g0417 1010 FunFam Chromosome transmission fidelity protein 18 530 597 - -
Alju06g0417 1010 CDD HLD_clamp_RFC 530 588 - -
Alju06g0417 1010 MobiDBLite consensus disorder prediction 475 495 - -
Alju06g0417 1010 Gene3D - 530 600 - -
Alju06g0417 1010 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 55 1010 - -
Alju06g0417 1010 MobiDBLite consensus disorder prediction 332 364 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0417 380 588 Core DNA Replication Machinery Family AT5G22010 28.571 8.78e-14 73.9