Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0407 ATGAGTACTTCAGATGAAGAACGCTCTGTTATAGGAAGCAAGGCAGAAATAGGGTTTCTAGATTTTGAGGAAGAGAAATCTGTCTATAGTTATGCTCCAAATGAAGAGGACCCTATTGTCATTTCCGTCCCATTTCCGGTAGTGAATGAGAAACCACAATCAGTATGTGTTGGCCAGACTGCTGTAGATGTAATAACGATCAAGAACACCACCAATGAACCAGTGGAACTTTGGAGTGTTCATATATTTGCTTCAAGTCCTGAGGACTGTTTCACGCTTTCTCTGATGGAACCTCCGTCAGCAAATTCAAATGTAGATAGCGTTCAAGGTTTTCTAGAGTCTTTCTCTTTGGAGGACAGGATGCTTCAACCTAATGAGATTTTGAAAGTATGGTTATGTTGCAAAACAAAGGAAATGGGATTGCACACCACAATTGTGTATGTTGATGCAGGGGATGAACGAATAGAAAGGACGGTTTTTCTCTTAGCTGAAGACAAAATCTCCCAGTCTTTGGCCTCCAAAAAGCCTTATTCAAAAGGAAGAAAGAAAGAAAAATTTTTTGTAAATACTTTTGTTGCTGGCTCACGTCCTCAGAGGAAGGGCAATCGTGCATACAAGAACAGGCTTCGAACATATGACATTCCCAAGGAAATAAGAGACATGCTGGAGAGCAATCAGATCCCTGATGCTATTGAAAGAGGTCTTACAAGGAGGAATTATGCTTCTTATTTCAAAACATTAGTAATGATGGAAGAGCTACAATTGGAGGAAGACATGAGGACCTATGATATGGAATGCGTGACTTTGAGGAAAAAGGCGAATCAATTCTTGTCATTGGAGGTTCTAGGGCTAGCTGAGAGAAGGCCATCACTGGTTCATGGGGACTATATTTTTGCCAAGTTAGCCTCTGAGCATGATAATGATAACATGCCTGCTTACCAGGGTTTTGTCCACCGTGTTGAGGCTGATGAAGTACATTTGAAGTTTGATCCTCAATTTCATTTTGCCCACAAAGAGGATGATCTCTACAACGTTCACTTCGCATATAATAGGCTCAATATGAGACGGTTATATCAGGCAATTGAGGCTGCAGAAAACCTAGGAAATGAATTCCTATTTCCGCATGAGACGTCTAGAAGGAGGCGTATTGAAACCTCTCATCTGGTGCCTATTTCTGGTAATATTAATGAGGAGCAGATGCTTGCGATCAAGAAGATTCTTGGATGCAAAGGTGCACCTCCTTATCTGATTCATGGTCCTCCAGGCACAGGAAAGACTAGTACAATAGTCGAAGCAGTCCTCCAACTCTACAAAAATCATAGGAAAGCTCACATTCTCATCTGTGCACCCTCAAATAGTGCTGCAGACTACCTACTTGAGAAACTCCTTGCTCAAAAGGCTGTCAAATTTCAAGATGAGGAAATATTTAGGCTCAATGCATCTACTAGGCCCTATGACGAAATCAAACCTGAGCTTATGCGCTTCTGCTACTTTGATGAGTGTGTCTTCAAGTGTCCTCCAGTCAATGCTCTCATGCAATTTAAGATCATGGTATCAACTTATATGAGTGTTTGTCTTCTTTATGCTGAAGGTGTTATTCGAGGTCACTTTTCACACATTTTCTTGGATGAGGCTGGCCAGGCGTCAGAACCAGAAACCATGATACCTATATCTCACCTCTGCAAAAGGGAGACTGTTGTCATTCTTGCTGGAGACCCAATGCAGTTGGGTCCGGTAATATATTCCAAGGAAGCAGAAAGCAATGGATCGGGGAAGTCATACTTGGAAAGATTGTTTGAATGTGACTTGTATTCCTATGGGGATAATAATTATATAACCAGATTGGTTAGAAACTATAGGTGTCACCCACAAATATTACATCTCCCTTCCAAGCTGTTTTATGAAGGAGAATTGATTGCGTGTAAGGATGATACTAGTTCTTTGTTGCTGAATGAAGACTTCCTCCCAAATAAGGAGTTCCCTGTTCTCTTCTTCGGCATCCAAGGATGTGATGAAAGAGAAGGGAGTAATCCATCATGGTTTAACCGAATTGAAGTGAGTAAGGTCATAGAGCTAGTCAAGAAGCTTACAACCGGTGGAAATATGAAGGAGGAAGACATTGGGATTATAACACCATATAGGCAACAAGTACTTAAAATAAAGCAGACACTTGAAAGTATAGATTTGCCAGAGATTAAAGTTGGAAGTGTTGAGCAGTTTCAGGGACAGGAGAGACGAGTTATTATAATATCAACTGTTCGCTCAACAATCAAACATAATGACTTTGACAGATTACACTGTTTGGGATTCCTGAGCAATCATCGAAGATTCAATGTTGCTATAACCCGTGCCATATCACTGCTGATTATTATTGGGAACCCTCACATAATCTCTCGGGACTACTATTGGCACAAACTCTTGTGGCATTGTGTGGACAATTCATCTTATCTTGGTTGTTCTCTTCCTGAAAGACTGGAGATTCAGGAGGACTCTGGCTTCAAAAATTTTCAAGAAAACTCATTGCCCTCTGAAGATGTGGCATGGGGTCAAGAAGATTCACCACAATCTGATTGTGAGTTGCCTAAACCAGCTGGTACTGATGAAGCTGAATGGTCTGATGGTTGGAAGTAG 2631 0.4113 MSTSDEERSVIGSKAEIGFLDFEEEKSVYSYAPNEEDPIVISVPFPVVNEKPQSVCVGQTAVDVITIKNTTNEPVELWSVHIFASSPEDCFTLSLMEPPSANSNVDSVQGFLESFSLEDRMLQPNEILKVWLCCKTKEMGLHTTIVYVDAGDERIERTVFLLAEDKISQSLASKKPYSKGRKKEKFFVNTFVAGSRPQRKGNRAYKNRLRTYDIPKEIRDMLESNQIPDAIERGLTRRNYASYFKTLVMMEELQLEEDMRTYDMECVTLRKKANQFLSLEVLGLAERRPSLVHGDYIFAKLASEHDNDNMPAYQGFVHRVEADEVHLKFDPQFHFAHKEDDLYNVHFAYNRLNMRRLYQAIEAAENLGNEFLFPHETSRRRRIETSHLVPISGNINEEQMLAIKKILGCKGAPPYLIHGPPGTGKTSTIVEAVLQLYKNHRKAHILICAPSNSAADYLLEKLLAQKAVKFQDEEIFRLNASTRPYDEIKPELMRFCYFDECVFKCPPVNALMQFKIMVSTYMSVCLLYAEGVIRGHFSHIFLDEAGQASEPETMIPISHLCKRETVVILAGDPMQLGPVIYSKEAESNGSGKSYLERLFECDLYSYGDNNYITRLVRNYRCHPQILHLPSKLFYEGELIACKDDTSSLLLNEDFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVIELVKKLTTGGNMKEEDIGIITPYRQQVLKIKQTLESIDLPEIKVGSVEQFQGQERRVIIISTVRSTIKHNDFDRLHCLGFLSNHRRFNVAITRAISLLIIIGNPHIISRDYYWHKLLWHCVDNSSYLGCSLPERLEIQEDSGFKNFQENSLPSEDVAWGQEDSPQSDCELPKPAGTDEAEWSDGWK 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0407 876 Gene3D - 314 606 IPR027417 -
Alju06g0407 876 PANTHER CANCER/TESTIS ANTIGEN 55 117 378 - -
Alju06g0407 876 Pfam AAA domain 592 794 IPR041679 -
Alju06g0407 876 FunFam Probable RNA helicase SDE3 620 819 - -
Alju06g0407 876 Gene3D - 620 823 IPR027417 -
Alju06g0407 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 807 IPR027417 -
Alju06g0407 876 MobiDBLite consensus disorder prediction 844 876 - -
Alju06g0407 876 CDD SF1_C_Upf1 621 810 IPR047187 -
Alju06g0407 876 FunFam Probable RNA helicase SDE3 344 489 - -
Alju06g0407 876 CDD DEXXQc_Helz-like 396 620 IPR026122 GO:0003723|GO:0032574
Alju06g0407 876 Pfam AAA domain 395 482 IPR041677 GO:0004386
Alju06g0407 876 Pfam AAA domain 536 583 IPR041677 GO:0004386
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0407 Alju-ChrAlju06 3306246 3311382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0407 394 551 Core DNA Replication Machinery Family AT1G08840 33.540 7.09e-10 61.2