Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0378 ATGAATGGTTCTGCAAGTTTTGAGGCAGAGGACTCTGAGTTCGTTGAAGTTGATCCCACTGGAAGATATGGAAGATACAACGAAATTCTTGGCAAAGGGGCTTCAAAGACAGTTTACAGAGCATTCGATGAGTATGAAGGGATAGAAGTAGCATGGAATCAAGTGAAGCTCTACGATTTTCTGCAGAATCCTGAAGATCTTGAGAGATTATACTGTGAAATTCATCTTCTCAAGACCTTGAAACACAAAAACATCATGAAGTTCTATACTTCCTGGGTTGATACTGCTAATAGGCATATTAACTTCGTCACTGAGATGTTCACCTCTGGCACTCTCAGACAGTTCAGGTTGAAGCACAAAAGAGTTAACATTAGAGCTGTGAAGCATTGGTGCAGGCAGATTTTGGAAGGGCTCCTTTATCTTCACAGTCATGATCCTCCTGTGATCCACAGAGACCTCAAATGTGACAACATTTTCATCAATGGCAATCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTCGCTGCGATTCTCCGCAAATCTAACGCTGCTCGTTGCGTTGGCACACCAGAGTTTATGGCTCCGGAAGTGTATGAAGAGGATTATAATGAATTAGTTGATATATACTCTTTTGGAATGTGCATCTTGGAGATGGTGACATTTGAATATCCTTACAGTGAATGCACCCATCCTGCTCAAATCTACAAGAAAGTTGTCTCTGGAAAGAAACCAGAGTCTCTCTACAAAGTAAAGGATCCTGAGGTTAGACAATTTGTGGAGAAATGCTTAGCAACCGTGTCTCTTAGACTTTCTGCAAAAGAACTTCTGAAAGACCCTTTTCTCCAAATCGATGACTACGGGTCTGACATGAGATCACTTCGGTATCAAGGAGATTGCTATGAAGTAACCCCTTTATATAGACAACCTCTTAATGGAGTTCACAGCAGTAACAACTCAATGTACACTGATTATCTCAGTGGTTATGGACCAGAATCTGAGCTAACCAGCGAAATTGATCTCTTTGAATGTGAAGAAGATGATAATTTGGCTGAAGCTGATACTGTAATCAAAGGCAGGAGAAGAGAAGATGATGGCGTTTTTCTCAGACTTCGAATAGCAGATAAGGAAGGTCGAGTTCGAAACATCTACTTCCCATTTGACATAGAGACCGATACAGCATTGAGTGTAGCGAATGAAATGGTGGCTGAGCTGGACATAACTGACCAAGATGTAACAAAAATAGCAGACATGATAGATAATGAAATCGCAAACTTGGTCCCAGAGTGGAATACTGGACCCATAACAGAGGAAAATCCAGAGTGCACAAGTGAAAGTCTCTGCTTCAATTGTGCTTCTCGTGGCAACTTCTTTGATTATGTATCATCAAACAGCCCATCAGCTAAGAAGCTACAATTTCTTCATTGTTCCAGAGATGGCTGCGCAGCCGTTCATGGCCGTTTCGAGGAGATCACATACCAAGTTGAGGGGTCTGAAAATTGTACTACAGATGGTCCTCCAGCTGCTTCAAGTCAATCTACTGGTATTCACTATACTGATATCTGGGCTCAAAGAGATGAGCCAGAACCAAGTTCAGAGGAGTTCAGAGACATATATGGTGATAATGGTGATAAATCACATGAGGCATCAAACAAATCAAAAGTTGAAGAGGATGAGACAAGTATTATTATTGCGGATGACCAAAGTAATCCCAACTCAAAAGACACATTTTCTAATCAAGAATTAGAATGTGTTTTCCTGGACTATGAGAATGAAATTAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGGGAGCTTAGAGACCAGCAATTAGTTGGAACCCCAAAACTTGCAAGCACATCTCCTGATCCTGAAGAATCAGAAGAGCATAGGAAATATGGTGGGGTCCCAAAGCTATCAGTAACAGCTCACTTGAAGTTACGGAACAATAAACCATTATTGAGGCTTTTAACCTCCAGGAAGCGATTTCTGGCTGATGCAGAGAAGAATAAGTTCTCATCTATGGCTAATACGGTGCAAGATGTAGATGAGACTAGTGGTTCTATTGGTCCTGAGCAGATGGTCACAGCCAATGATTTCTATGCTGGATCTTTGCTTCCACACTCGCTTCATAGAGCGACCTCTCTTCCAGTTGATGCAATAGATGCATAG 2184 0.4153 MNGSASFEAEDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRHINFVTEMFTSGTLRQFRLKHKRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPESLYKVKDPEVRQFVEKCLATVSLRLSAKELLKDPFLQIDDYGSDMRSLRYQGDCYEVTPLYRQPLNGVHSSNNSMYTDYLSGYGPESELTSEIDLFECEEDDNLAEADTVIKGRRREDDGVFLRLRIADKEGRVRNIYFPFDIETDTALSVANEMVAELDITDQDVTKIADMIDNEIANLVPEWNTGPITEENPECTSESLCFNCASRGNFFDYVSSNSPSAKKLQFLHCSRDGCAAVHGRFEEITYQVEGSENCTTDGPPAASSQSTGIHYTDIWAQRDEPEPSSEEFRDIYGDNGDKSHEASNKSKVEEDETSIIIADDQSNPNSKDTFSNQELECVFLDYENEIRQELRWLKAKYQMQLRELRDQQLVGTPKLASTSPDPEESEEHRKYGGVPKLSVTAHLKLRNNKPLLRLLTSRKRFLADAEKNKFSSMANTVQDVDETSGSIGPEQMVTANDFYAGSLLPHSLHRATSLPVDAIDA 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0378 727 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 368 422 IPR024678 GO:0004674|GO:0005524
Alju06g0378 727 Coils Coil 593 613 - -
Alju06g0378 727 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Alju06g0378 727 MobiDBLite consensus disorder prediction 522 560 - -
Alju06g0378 727 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Alju06g0378 727 Gene3D - 365 445 - -
Alju06g0378 727 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 631 - -
Alju06g0378 727 MobiDBLite consensus disorder prediction 522 575 - -
Alju06g0378 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Alju06g0378 727 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0378 727 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0378 727 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Alju06g0378 727 CDD STKc_WNK 22 281 - -
Alju06g0378 727 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0378 727 FunFam probable serine/threonine-protein kinase WNK9 364 448 - -
Alju06g0378 727 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Alju06g0378 727 MobiDBLite consensus disorder prediction 617 637 - -
Alju06g0378 727 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0378 Alju-ChrAlju06 3136628 3139533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0378 1 626 MAP Kinase Kinase Kinase AT3G22420 52.711 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Alju06g0378 Pkinase 1.3e-49 CL0016