Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0374 ATGTCCTTAACTTCACTTCTATTTGTCGTGTTGAAATCTCACATTATACTTGCTCCAAATTATCATCAAGGAATTGATGGTCAAAACTTATTATCAAGGTGGAATCAGTACTGTCTTTCTCTTCCGTCTCCCTCTCTTCCTTGCCAAGCGGTCCCGCCCCTTCTGACACTCTCCTTCACCAGCTTCTGTTGCTTCCACTTCCCTCTCGTAACCTTCTTTCCTCCATCTCTTGTCACATATTTTGCTCCACCAAGAATGGCCGAAGCTTCATACACCGTGGCATCTGACAGTGAAACCATTGGGGAGGATAAGTCATCAGCTTTTCCTGAAATTGCCATTGGAATCGACATTGGCACATCACAATGTAGTGTTGCTGTGTGGAATGGATCTGAAGTGGAGCTTTTGAAGAACACAAGAAACCAGAAGATTATGAGATCATATGTGACTTTTAAAGATGACACCCCTTCTGGAGGAGTTAGGAATCAGCTTTCTCAAGAACATGACTTGTTATCTGGAGCTACAATCTTTAATATGAAACGCTTGATTGGAAGAGTTGATACAGACCCAGTTGTCCACTCCAGTAAAAATCTCCCTTTTCTGGTACAGACCTTGGATATTGGTGTGCGTCCTTTCATTGCAGCATTAGTGAACAATATGTGGAGATCCACCTCGCCGGAAGAAGTCTTGGCTATATTTCTTGTGGAACTAAGAGTAATGGCCGAAGCTCAGCTGAAACGACCAATAAGAAATGTAGTCCTCACTGTTCCGGTTTCATTCAGTCGATTCCAACTGACCCGGATAGAACGAGCTTGTGCTATGGCCGGCCTTCATGTTCTCCGGCTAATGCCTGAACCAACTGCTGTGGCTTTATTATATGGACAGCAGCAGCAACAGAGTTCTCATGATAATATGGGCAGTGGAAGTGAGAAGATTGCTTTAATTTTCAACATGGGTGCTGGCTACTGTGATGTTGCTGTGACTGCTACAGCTGGAGGAGTATCACAAATAAAGGCCTTAGCAGGAAGTACCATCGGGGGAGAAGACTTGCTTCAGAATATGATGCATTATCTGTTACCAGAATCTCAAACTGTATTCAAGACCCACGGTATCAAAGAAATCAAATCTATGGCCTTGCTCCGAGTTGCAACTCAAGACGCCATTCATAGGCTCTCCTCTCAAACCAGTGTGCAAATTGATGTAGACTTGGGAGACGGTTTGAAGATAAACAAGGTTATAAACCGGGACGAGTTTGAAGAAGTGAACAGAAAGATTTTTGTGAAGTGTGAAAGCCTCATCATCCAGTGTTTGCAAGATGCCAAGGTAGAGGTTGAGGATGTAAACGATGTGATAGTCGTTGGTGGGTGCTCTTATATTCCGAAGGTGAAGAATCTTGTGGCTAGCATGTTTAATGGCAAGGAACTTTACAAAGGTGTGAATCCTCTGGAAGCTGCCGTTCGTGGTGCAGCAATTGAGGGAGCTGTAGCATCAGGTATCAATGATCCCTTTGGAAACTTAGACTTGCTAACTATCCAAGCCACACCCCTGGCTATAGGGATAAGAGCTGATGGAAACAGCTTTGTCCCTGTGATACCAAGGAATACAACAATTCCAGCAAGGAGGGACTTGGTCTTCAGAACTTGTCATGATAATCAAACTGAGGCTTTGATCATTGTGTATGAAGGTGAGGAAAAGAAGGCTGAAGAGAATCATTTGTTGGGATACTTCAAAATAGTAGGAATTCCTGAAGCACCCAAAGGAGTTCCGGAGATTAATGTGTGCATGGATATAGATGCTGCAAATGTACTGAGAGTATTAGTGGGTGTTGTAATGTCAGGGTCCCGGCAGCCGGCAATTCCGGTCATGGAAGTGAGGATGCCAACTGTTGATGATGGCCATGGTTGGTGCGTTGAGGCTTTAAATAGCAAGTGTGGTAATGCACGAGACTTGGTTACTGTCCAGAAGAAAGCATAA 1971 0.4404 MSLTSLLFVVLKSHIILAPNYHQGIDGQNLLSRWNQYCLSLPSPSLPCQAVPPLLTLSFTSFCCFHFPLVTFFPPSLVTYFAPPRMAEASYTVASDSETIGEDKSSAFPEIAIGIDIGTSQCSVAVWNGSEVELLKNTRNQKIMRSYVTFKDDTPSGGVRNQLSQEHDLLSGATIFNMKRLIGRVDTDPVVHSSKNLPFLVQTLDIGVRPFIAALVNNMWRSTSPEEVLAIFLVELRVMAEAQLKRPIRNVVLTVPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYGQQQQQSSHDNMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMHYLLPESQTVFKTHGIKEIKSMALLRVATQDAIHRLSSQTSVQIDVDLGDGLKINKVINRDEFEEVNRKIFVKCESLIIQCLQDAKVEVEDVNDVIVVGGCSYIPKVKNLVASMFNGKELYKGVNPLEAAVRGAAIEGAVASGINDPFGNLDLLTIQATPLAIGIRADGNSFVPVIPRNTTIPARRDLVFRTCHDNQTEALIIVYEGEEKKAEENHLLGYFKIVGIPEAPKGVPEINVCMDIDAANVLRVLVGVVMSGSRQPAIPVMEVRMPTVDDGHGWCVEALNSKCGNARDLVTVQKKA 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0374 656 FunFam Heat shock 70 kDa protein 8 346 427 - -
Alju06g0374 656 Gene3D - 297 475 - -
Alju06g0374 656 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 503 620 IPR029047 -
Alju06g0374 656 CDD HSP70_NBD 113 493 - -
Alju06g0374 656 Gene3D - 176 231 - -
Alju06g0374 656 PRINTS 70kDa heat shock protein signature 446 462 - -
Alju06g0374 656 PRINTS 70kDa heat shock protein signature 587 603 - -
Alju06g0374 656 PRINTS 70kDa heat shock protein signature 478 498 - -
Alju06g0374 656 PRINTS 70kDa heat shock protein signature 111 124 - -
Alju06g0374 656 PRINTS 70kDa heat shock protein signature 251 271 - -
Alju06g0374 656 PRINTS 70kDa heat shock protein signature 139 151 - -
Alju06g0374 656 PRINTS 70kDa heat shock protein signature 506 525 - -
Alju06g0374 656 Pfam Hsp70 protein 112 604 IPR013126 GO:0005524|GO:0140662
Alju06g0374 656 Gene3D - 113 493 - -
Alju06g0374 656 FunFam Heat shock 70 kDa protein 8 501 616 - -
Alju06g0374 656 SUPERFAMILY Actin-like ATPase domain 111 295 IPR043129 -
Alju06g0374 656 FunFam Heat shock 70 kDa protein 8 176 231 - -
Alju06g0374 656 Gene3D Actin; Chain A, domain 4 346 427 - -
Alju06g0374 656 PANTHER HEAT SHOCK PROTEIN 70KDA 112 606 IPR013126 GO:0005524|GO:0140662
Alju06g0374 656 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 508 615 IPR029047 -
Alju06g0374 656 SUPERFAMILY Actin-like ATPase domain 309 496 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0374 Alju-ChrAlju06 3094504 3098153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0374 112 614 Calmodulin-binding Proteins AT3G12580 39.147 4.53e-107 336