Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0372 ATGGATGTTCATGTCCCCACTAAACTCCTCCCACTCTGTGTACCTTTTTTCGTGTTTCTTTTATGTTCTAATGCTCAAACAAGCTCAAATTCTATCCAACCGGGTTCAAGCCTCATTGCTGGCTCTAATACATCTTGGAGATCGCCTTCTGCTGACTTCGCTTTTGGGTTCTATCCTCTCCTCAATGGTCGCTACCTTGTCGGTATTTGGTTCGATAAGATTATTCCCCACAAAACTCTGGTCTGGTCCGCAAATCGTGATGATCCGGCTCAATTTGGATCCTCCATGAATCTCACGCTGAGTGGCCAGTTAGTGCTCCATCATGCCAATGGGTCATTGGTTTCAATCTACAATCAAACAAATAACGCTTCTTCTGCTTCAATGCAGGATAATGGAAACTTCGTCTTGAAAAACTCACTCTCAAACACCATCTGGGAGAGCTTTGCTTCACCCACAGATACCATTCTGCCAGGTCAAAAATTGGGCATGGGTCAGATTCTTTACTCCAATGCCAATGGAACAATTGATTACTCGACCGGGAATTACAAGTTGGAGGTCCAATCTGATGGCAACATTGTTCTCGATGCTTTCAGGATTCCCGGTGATGCTTATTGGAACGCTATGACAATCGGCCATAAAAATGTCAGCATTGTCTTCGACAACAATACAGCTACGCTTTACGCCGTCAACGGCACTCAAACCGTATCCCAAATGACACTCCAAAGCGAACTACCTTCCTCAATCGAAGGTTACTACCATCGAGCAACCATCAATGATCATGGTAACTTCGAACAGTTGATTTTTCGTAAAGAAGATGGAACAGAGTGGACGTCTATATGGAGTGCGATAACAGAGCCCTGTTTGGTGGATGGTATTTGTGGGGTGAATGGCTTTTGCACTTCACCAGACAACAAGGTGGTCAATTGTAGCTGCTTGCCTGGGTATTCACCTTTGGATCCTTATGTTCCCTCCAAAGGCTGTTATCCTAATTTGGTGTTGGATTTTTGCTCTTCAGATTCATCTGCCTCAGACTTCATTGTGCAGGAGATTTATGATGCTGATATACACAACTATCATTTTGGTAATATGCAATGGATACGTAATTCTGATTTGAATAGTTGCAAGAGTGAAGTGATGAATGATTGTTTTTGCATGGCTGCTGTTTTGACCGGCACCGATTGTTTTAAGAAAAGGACACCTCTTTTGAATGGAAGAATAAGCATCCCAACCACCCGCGATATAGTGGCGCTAGTTAAAGTTCCCGTGGTTCGCAAAAATGACTCACCTTGGGTTGTACTGCTTGTTTCATTCTTGTCTTGTTCCCTGCTCACTCTTGTGTTTGCAGCTTCTGCTATTCGTCATAACCCAAAGTTTCACCGTTGGATACATAAGGAGCCACCCCCCAAGCCAAAGCTAGTGGACGTCAATCTCAAGACATTTTCATTCCAAGAGTTGAGGGAAGCAACAAAGGGCTTCAAGAACAAACTTGGGCGAGGCGCATTTGGTACTGTGTATGGTGGGATCTTGACGTTGGAGGGCGAACAGGTTGAGGTTGCCGTTAAACAACTGGAAAAAACAGAGGATCAAGATGAGATTCGTGAGAATGAGTTTGTGACAGAAGTTCAGGTCATTGGTCTGACTCATCACAGGAATCTTGTCAGGTTATTAGGTTTCTGCAATGAACAACATCATCGTCTTCTAGTTTATGAGATGATGAAAAATGGGTCGCTCTCCAGTTTACTTTTTGGGGAAGGAGATAAACCCAAATGGGAAGATAGAGCCAAGATTGTGCTTCAAGTTGCAAGGGGTTTGCTATATCTGCATGAGGAGTGTGACCCACAGATTATCCATTGCGACATAAAGCCACAAAATGTTCTTCTTGATTCCAATTATGGGGCAAAAGTTTCTGATTTTGGGGTTGCAAAGCTGCTAAAGAAAGACAAAACTAGAACCAGCACAAACGTAAGAGGGACAGTGGGATATATGGCACCAGAATGGCTCAAGAATGCACCAGTCACGTCAAAGGTTGATGTTTATAGCTTTGGGGTGATGTTATTGGAGACCATATTTTGTAGAAGGCACATAGAGCTGCATCAAATTGAAGAGGAAGGAGGTGACGACGTGATTCTAATGGATTGGGTTGTATACTTGGTAAAAGAAGGGAATTTGAGAGTGCTGGTGGATCATGATATTGAAATTTTGAATGATTTCAATAGCTTTGAGAGGATGACTATGGTTGGATTATGGTGCCTGTCTCCTAACCCAACGGTTCGGCCGTCTATGAAGAAGGTGACGCAGATGTTGGAAGGAACCATGGAGGTTGGTGTTCCTCCTCTTATTGATGCACAAATGTTTTAA 2358 0.4338 MDVHVPTKLLPLCVPFFVFLLCSNAQTSSNSIQPGSSLIAGSNTSWRSPSADFAFGFYPLLNGRYLVGIWFDKIIPHKTLVWSANRDDPAQFGSSMNLTLSGQLVLHHANGSLVSIYNQTNNASSASMQDNGNFVLKNSLSNTIWESFASPTDTILPGQKLGMGQILYSNANGTIDYSTGNYKLEVQSDGNIVLDAFRIPGDAYWNAMTIGHKNVSIVFDNNTATLYAVNGTQTVSQMTLQSELPSSIEGYYHRATINDHGNFEQLIFRKEDGTEWTSIWSAITEPCLVDGICGVNGFCTSPDNKVVNCSCLPGYSPLDPYVPSKGCYPNLVLDFCSSDSSASDFIVQEIYDADIHNYHFGNMQWIRNSDLNSCKSEVMNDCFCMAAVLTGTDCFKKRTPLLNGRISIPTTRDIVALVKVPVVRKNDSPWVVLLVSFLSCSLLTLVFAASAIRHNPKFHRWIHKEPPPKPKLVDVNLKTFSFQELREATKGFKNKLGRGAFGTVYGGILTLEGEQVEVAVKQLEKTEDQDEIRENEFVTEVQVIGLTHHRNLVRLLGFCNEQHHRLLVYEMMKNGSLSSLLFGEGDKPKWEDRAKIVLQVARGLLYLHEECDPQIIHCDIKPQNVLLDSNYGAKVSDFGVAKLLKKDKTRTSTNVRGTVGYMAPEWLKNAPVTSKVDVYSFGVMLLETIFCRRHIELHQIEEEGGDDVILMDWVVYLVKEGNLRVLVDHDIEILNDFNSFERMTMVGLWCLSPNPTVRPSMKKVTQMLEGTMEVGVPPLIDAQMF 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0372 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 25 149 - -
Alju06g0372 785 ProSiteProfiles Bulb-type lectin domain profile. 23 149 IPR001480 -
Alju06g0372 785 Gene3D - 23 150 IPR036426 -
Alju06g0372 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 776 - -
Alju06g0372 785 ProSitePatterns Protein kinases ATP-binding region signature. 496 521 IPR017441 GO:0005524
Alju06g0372 785 CDD B_lectin 29 151 IPR001480 -
Alju06g0372 785 Gene3D - 151 286 - -
Alju06g0372 785 Pfam S-locus glycoprotein domain 249 317 IPR000858 GO:0048544
Alju06g0372 785 Pfam D-mannose binding lectin 79 164 IPR001480 -
Alju06g0372 785 FunFam S-receptor-like serine/threonine-protein kinase 460 571 - -
Alju06g0372 785 SMART serkin_6 490 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0372 785 Gene3D Phosphorylase Kinase; domain 1 465 571 - -
Alju06g0372 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Alju06g0372 785 PIRSF SRK 2 784 IPR024171 GO:0004674
Alju06g0372 785 CDD STKc_IRAK 496 770 - -
Alju06g0372 785 Gene3D Transferase(Phosphotransferase) domain 1 572 775 - -
Alju06g0372 785 SMART blect_4 37 151 IPR001480 -
Alju06g0372 785 Pfam Protein kinase domain 493 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0372 785 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 39 778 - -
Alju06g0372 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 206 IPR036426 -
Alju06g0372 785 SUPERFAMILY Protein kinase-like (PK-like) 471 769 IPR011009 -
Alju06g0372 785 ProSiteProfiles Protein kinase domain profile. 490 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0372 Alju-ChrAlju06 3086736 3089093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0372 477 770 Receptor kinase-like Gene Family AT1G71830 44.702 3.14e-70 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju06g0372 Pkinase 8e-52 CL0016