Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0371 ATGTCGTCTTCTATAATCCTGCCCTGCATCCTTGTGCTGGTTTCATTCTTAGGCGTCTTACATGCCCAGAATAATCCTTCCTCCACATTAAATTTGAATTCCAACATCACTGCTGGATCCAATGCTTCTTTGAAATCACCATTAGGTGATTTTGAATTTGGATTCTACCATCTTCCCGGAGATTACTATCTGGTCGGAATTTGGTTTGCGAATACTATCCCACAGAAAACTCTGGTTTGGTACTTTAACCCACCTGTGAAAGCAAATTCAGTAATCCAATTCTCTTCAGAAGGCCACCTTTTGCTCATATATCCAAACGGAACCTCTGTTCAGATAGACAGTAAAAATGTAGATAGGGCAAGCTCAGCCTCCTTAGAGAACAATGGCAATTTGGTAATGAAAGACTCCAATTTTGGAGTTGTCTGGGAGAGTTTTCGATTTCCCACTAACACAATGCTTCCGGGTCAAGTCTTAAACGAGGACGATGCGCTATATTCTAAAGGTAAAGAATCTCTGAATTACTCAAATGGAAACTTCAGGTTACTGATGCAAAGCGATGGGAACTTGGTACTTATTGCTTATCTATGGGAAGATCCTTCTTATTGGAACTCCGGCACAGTATCAAACGATAACGACATGAGCTTGGTATTCGATAATACTAGTGCCTCCTTGTATGTTGCTAAGGGCTCCATCAACATACATTCTTTGACAAATAACACTCCAGCCCCGACTGGAGATTTTTATCACCGAGCAACAATAGATGAAAATGGAAATTTTCATCGATGTGCTTATAATCGAAGGAATAGCAGTGGGTGGATTAGGATCTGGAGTGCCATTGATGACCCTTGCAGAGTGAATGCTATTTGTGGAGTGAATAGCTTGTGCACTTCACCTGATAATGAATCAGTCAAGTGTGATTGCCTTCCGGGTTTTATCCCGTTTAATACAACAGATGTGTCCTCATTAGGATGTCGTCCAGAAACCATGATTAATTATTGTACACAAGACCCTTCAATGTTGAGCTTCAAGCTGGAGGTTCTTGATGATACTGATTTTCAGTTTGGTTCCGAATCAGACTTTGCTGTGCTAGAACCTGCAGATTTGGAATCCTGTAAGAAATATGTCATGGATGATTGTAATGTCGTTGCTGCTACCTTCAATGCTACTTCTTCAACATGTGCCAAGAAAAGGATGCCATTGGTGAATGCGAGAAAGAGTTCATCTTCTAAGGGGCAAAAAGCTCTACTTAAGGTTACCAATGACAACAATAATGCAACTGCAAGATTACAAGGTTCAAAAAAGAAGAATTTTAATGTCAGAGTTTTTCTCAAGGTCATGCTTGCTGTTAGTTCCACCCTTGCTTGCTTGTTTGGAGCCCTTGCTGTCTATTACCATCCCTTAGCTCGAAGATTAATGAGAAGAAACAAGTTTCTACATGCAAGTGTCATTGGAATCAACTTCAGAGAGTTCACATTTCAGGAGCTTCATGACGCAACAAGTGGGTTCAGTAAGACTATTGGTAAAGGATCTTCAGGCAAAGTCTACAGTGGAAATCTTGCTATTGATGATGCAAGAACTGCTATTGCGGTGAAGAAGCTGGATAAGAGATCTATTGAAAGAAGTGAACAGGAGTTCATGACTGAGCTCAAGATAATCGGTCGCACTCATCACAAAAACTTGGTAAGACTTCTGGGATTTTGCTTTGAGAAAAGCCATAGACTCCTTGTCTACGAGCTACTTCCAAATGGAGCACTGTCCAATTTTCTGTTTGGACAACGAGAAAAACCTCATTGGGGTCAGAGGATTGACATAGCTCTTGGAATTGCAAGGGGCTTACTTTACTTGCATGAAGAGTGTGAGACCCAAATCATACATTGCGACATCAAACCCCAAAATGTGCTGCTGGATGCCAATTATACAGCAAAGATTGCTGATTTTGGGCTGTCCAAGCTTCTCAAAAAAGAGCAAACAAGAACTAACACTAAATTCAGAGGAACTATAGGGTACATAGCGCCTGAGTGGCTAAGGAGCGCACCCATAACTTCTAAAGTTGATGTCTTTAGCTTTGGGATTATGTTGCTTGAGATTATTTGTTGCAAAAGGCATGTCGAACAGAGTCAAGAAGCAGGTGGAGAAAGTGATGAAGATGATCCAATCCTTGCAGAATGGGTTTTGAGGTGCATAGTGTCAAAGAAATTAGAGGAATTAGCAGGTCATGACTCGGAAGTACTGGGTGATATGAAGAGGTTAGAGCAAATGGCGTTGGTTGGGCTATGGTGTATCCATCCAGATGCAGCACTGAGACCAACAATGAAGGAGGTGAATCAAATGCTTGAGGGAAACATAGTTGTTGGGGTCCCTCCTTTGCTTTATGGGCAAATGACAGCAGACCAGAGCCTTTAG 2403 0.4149 MSSSIILPCILVLVSFLGVLHAQNNPSSTLNLNSNITAGSNASLKSPLGDFEFGFYHLPGDYYLVGIWFANTIPQKTLVWYFNPPVKANSVIQFSSEGHLLLIYPNGTSVQIDSKNVDRASSASLENNGNLVMKDSNFGVVWESFRFPTNTMLPGQVLNEDDALYSKGKESLNYSNGNFRLLMQSDGNLVLIAYLWEDPSYWNSGTVSNDNDMSLVFDNTSASLYVAKGSINIHSLTNNTPAPTGDFYHRATIDENGNFHRCAYNRRNSSGWIRIWSAIDDPCRVNAICGVNSLCTSPDNESVKCDCLPGFIPFNTTDVSSLGCRPETMINYCTQDPSMLSFKLEVLDDTDFQFGSESDFAVLEPADLESCKKYVMDDCNVVAATFNATSSTCAKKRMPLVNARKSSSSKGQKALLKVTNDNNNATARLQGSKKKNFNVRVFLKVMLAVSSTLACLFGALAVYYHPLARRLMRRNKFLHASVIGINFREFTFQELHDATSGFSKTIGKGSSGKVYSGNLAIDDARTAIAVKKLDKRSIERSEQEFMTELKIIGRTHHKNLVRLLGFCFEKSHRLLVYELLPNGALSNFLFGQREKPHWGQRIDIALGIARGLLYLHEECETQIIHCDIKPQNVLLDANYTAKIADFGLSKLLKKEQTRTNTKFRGTIGYIAPEWLRSAPITSKVDVFSFGIMLLEIICCKRHVEQSQEAGGESDEDDPILAEWVLRCIVSKKLEELAGHDSEVLGDMKRLEQMALVGLWCIHPDAALRPTMKEVNQMLEGNIVVGVPPLLYGQMTADQSL 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0371 800 Gene3D - 149 289 - -
Alju06g0371 800 Pfam D-mannose binding lectin 77 161 IPR001480 -
Alju06g0371 800 Gene3D Transferase(Phosphotransferase) domain 1 580 783 - -
Alju06g0371 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 207 IPR036426 -
Alju06g0371 800 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 788 - -
Alju06g0371 800 SMART serkin_6 500 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0371 800 PIRSF SRK 1 798 IPR024171 GO:0004674
Alju06g0371 800 FunFam S-receptor-like serine/threonine-protein kinase 470 579 - -
Alju06g0371 800 CDD STKc_IRAK 506 780 - -
Alju06g0371 800 Pfam S-locus glycoprotein domain 246 313 IPR000858 GO:0048544
Alju06g0371 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 785 - -
Alju06g0371 800 ProSitePatterns Protein kinases ATP-binding region signature. 506 532 IPR017441 GO:0005524
Alju06g0371 800 ProSiteProfiles Bulb-type lectin domain profile. 29 146 IPR001480 -
Alju06g0371 800 Gene3D Phosphorylase Kinase; domain 1 476 579 - -
Alju06g0371 800 Gene3D - 23 147 IPR036426 -
Alju06g0371 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Alju06g0371 800 ProSiteProfiles Protein kinase domain profile. 500 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0371 800 SUPERFAMILY Protein kinase-like (PK-like) 478 779 IPR011009 -
Alju06g0371 800 Pfam Protein kinase domain 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0371 800 SMART blect_4 29 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0371 Alju-ChrAlju06 3082873 3085275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0371 445 788 Receptor kinase-like Gene Family AT3G53380 39.595 6.75e-68 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju06g0371 Pkinase 3.2e-50 CL0016