Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0339 ATGATCACCTCCGTTCCGCTCATAAAAGTAGATTAAAAATACCACTTTCGTTCGAAGCGAGCTTCCCGCAGCCCCGTAGCCAATCACGACTCTCTTCGAACGAGAAGAGAGAGAACGAAGAAGATGGCCATTGTGGACAGCACTGTCAGTCTCTTTCTTCTCATCATGCTCATTCTCATCATCGTCCTCGTCTTCTTTGCCTGTAAACCATGGCGCTTCCTTTGCTCTTCCCACTCCCGTTCCCGTTCCTCCATCAAGGCTAATGAAATTGAGAGGCCTCTTGTCTTGGATGATGCAAATTTGGTACACAATCCAATTAGTGAACTGCCTATAGATTATGATCTTGAGGGTGCATCCATCCTCAATGAAGGCCATTTTCGCCCACCTCGACCCCCTGGACTTATCTATAAGCAAAGGCTTTCTGCTGCATCTTACCATATGCCTCAAGATGTAACTTCTGATCCTTCAGAAGACGTTGCTGTTGGCCAGACACTTAAACTGTCTCCAGCCCAGTTGGCAGAGTTTCAGAAACATAATAGACATTTTGAAACTGACAGACTGCAAGACTTTGTACAGAGAGATATATTAGATCAAAGTGCAGGAAGTTGCCTCACTCTAGAGGTGATCACTGGTCCTTCTCGTGGACTTCGTTATTCTGTACAATCAACAGTTCCATCCAAGCTACCACTGACCCTGGGAAGAGTTTCTCCTAGTGATTTGTTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCACTAATAAACTGGAATTTGGAGAAAATGAAATGGGAGTTGGTAGATATGGGTAGCCTTAATGGAACACTCTTGAATTCTCAGCCAATCAACCATTTAGACCCTGGAAGCAGGCAATGGAGTAATCCAACTGAGCTTGCTAATGGAGATATCATAACACTAGGAATGACAACAAAAGTAATTGTTCATATTACTTCTCAAAATAAGATTCACATTCCCTTTGGAGTTGGTATGTCATCAGATCCCATGTGTAGGCGTCAAGGAGGGAAAAAGCTCGCCATGGAAGATGTTTGCTATTATCAATGGCCTTTACCTGGATTGGATAAGTTTGGACTGTTTGGCATTTGTGATGGGCATGGTGGAGATGGGGCTGCCAGATCTGCTAGCAAACTTTTCCCTGAGATAGTTGCAAATATATTATCAGATTCGCTAAAGAGAGAAAAGGTTGTATCAATCTGTGATGCTTCAAATGTTCTTAGAGATGCATTTTCTCAAACAGAAGCTTGCCTGAATCACTATTATGAGCATTCCAAAGTACAGTGGGTAGCAGCAAACAATATGTTGACGTCTTGGTTGGTCAACTCCAGGACCAGTACCACTGACCACCGGTAG 1365 0.4337 MITSVPLIKVDXKYHFRSKRASRSPVANHDSLRTRRERTKKMAIVDSTVSLFLLIMLILIIVLVFFACKPWRFLCSSHSRSRSSIKANEIERPLVLDDANLVHNPISELPIDYDLEGASILNEGHFRPPRPPGLIYKQRLSAASYHMPQDVTSDPSEDVAVGQTLKLSPAQLAEFQKHNRHFETDRLQDFVQRDILDQSAGSCLTLEVITGPSRGLRYSVQSTVPSKLPLTLGRVSPSDLLIKDSEVSGKHALINWNLEKMKWELVDMGSLNGTLLNSQPINHLDPGSRQWSNPTELANGDIITLGMTTKVIVHITSQNKIHIPFGVGMSSDPMCRRQGGKKLAMEDVCYYQWPLPGLDKFGLFGICDGHGGDGAARSASKLFPEIVANILSDSLKREKVVSICDASNVLRDAFSQTEACLNHYYEHSKVQWVAANNMLTSWLVNSRTSTTDHR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0339 454 ProSiteProfiles Forkhead-associated (FHA) domain profile. 230 281 IPR000253 GO:0005515
Alju06g0339 454 SMART FHA_2 229 281 IPR000253 GO:0005515
Alju06g0339 454 Pfam FHA domain 231 306 IPR000253 GO:0005515
Alju06g0339 454 Gene3D - 333 452 IPR036457 -
Alju06g0339 454 Gene3D - 198 332 - -
Alju06g0339 454 CDD FHA_PP2C70-like 204 314 - -
Alju06g0339 454 SUPERFAMILY PP2C-like 334 427 IPR036457 -
Alju06g0339 454 PANTHER ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1 224 316 - -
Alju06g0339 454 ProSitePatterns PPM-type phosphatase domain signature. 363 371 IPR000222 GO:0043169
Alju06g0339 454 ProSiteProfiles PPM-type phosphatase domain profile. 326 454 IPR001932 -
Alju06g0339 454 SUPERFAMILY SMAD/FHA domain 203 313 IPR008984 GO:0005515
Alju06g0339 454 FunFam Protein phosphatase 2C 70 199 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0339 Alju-ChrAlju06 2835333 2840483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0339 42 426 PP2C-type Phosphatase Gene Family AT5G19280 54.902 7.75e-136 401