Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0333 ATGGATAGTTTCACCTCTTCCTCGTCTCTTCCTCCTCCTCCTCTACCTCTGTCCGACATTCTTCCCACATCGGCTTCATCCTCTTCTGGTGCTCTCGACGACGGTTCCGAGGACTCCTGCAGTATTTGTTTAGAGCCTTTCAGCACCGATGACCCTGCTACTATAACAAATTGCAAACATGAATATCATCTGCACTGTATTCTTGAATGGTCTCAGAGAAGCAAAGAGTGTCCAATCTGTTGGCAGATGCTCGTCTTGAAAGACCCAGCCAACCAAGAACTTCTAGCTGCAGTGGAAGCTGAAAAACGGGCAAGGTCAAGAAGCTCATACTCCTCTGCATTCCCATATCCTCGTATCCCCATTGAACGGCATAGTGCAGAACATGATGATTCTTGTTCAGATGACTCTGATTTTGATGAACAAATTATGCAGCACCTAGTTGCTGCTGCAAGTAGAGCACATTATTTTCGTAGACGGGAAATGCAAAGATCATCTGGAGTGGGTCCATCTCGGATTCCTGTACCTGATTATTCATTGCATGTCTCCGGGCTGCAACCAGTGCATGCAACTTCACCTTCTGGAGGTAGTTCACCTAATTCTGGTCCTGCTTCAGACGTTCAACCCCCACCATCTGCCCCTTCCTCTGTTGAAGCAGTTACAAGAAATGCCACTCCTGAAACTGATGACCCTTTCAAAGCCAGGGTTCTTCATAGCCAGCCACCTTCTGAGAGTGTGAGAAGACTGAACACTTCTGAAATGTTTACCTTCCCTGAGTCCATCAAGACCAAATTTTCTGCTGCTTCAGCCAGATATAAAGAATCTATTTCTAAAAGTACTCGGGGCCTTAAAGAGAAGTTGCTTGCTCGTAATGCTTCAGTAAAAGAGCTGAGTAAAGGTGTTCAGCGTGAGATGAATGCTGGCATTGCTGGTGTTGCACGGATGATTGAACGCCTTGATCTCGCCTCAAAACGGGCTACTGCTTCTCCTCCCATGCCTAGCTCTACTGTAGGAACTTCTGGCTTCCCCTTTAAAGGAAAGACTGTCCAAGAAAATGGTGGTGGACAGTCTCTTCTCTCTGCTGTTAAGGAAGAGAGTGGAGTTGTCATTCATGATGTTAGACCAAGCCCTCCTGCACCGGTTTCCAGCTCGGCTGTTAGTCCAGTAGAATATCCTCAACCACATGTTGAGAGTGGACGGGATGAGGTAAAGACTTAG 1215 0.4691 MDSFTSSSSLPPPPLPLSDILPTSASSSSGALDDGSEDSCSICLEPFSTDDPATITNCKHEYHLHCILEWSQRSKECPICWQMLVLKDPANQELLAAVEAEKRARSRSSYSSAFPYPRIPIERHSAEHDDSCSDDSDFDEQIMQHLVAAASRAHYFRRREMQRSSGVGPSRIPVPDYSLHVSGLQPVHATSPSGGSSPNSGPASDVQPPPSAPSSVEAVTRNATPETDDPFKARVLHSQPPSESVRRLNTSEMFTFPESIKTKFSAASARYKESISKSTRGLKEKLLARNASVKELSKGVQREMNAGIAGVARMIERLDLASKRATASPPMPSSTVGTSGFPFKGKTVQENGGGQSLLSAVKEESGVVIHDVRPSPPAPVSSSAVSPVEYPQPHVESGRDEVKT 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0333 404 SUPERFAMILY RING/U-box 34 87 - -
Alju06g0333 404 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 96 IPR013083 -
Alju06g0333 404 MobiDBLite consensus disorder prediction 184 246 - -
Alju06g0333 404 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 9 89 - -
Alju06g0333 404 MobiDBLite consensus disorder prediction 1 33 - -
Alju06g0333 404 ProSiteProfiles Zinc finger RING-type profile. 40 80 IPR001841 -
Alju06g0333 404 MobiDBLite consensus disorder prediction 368 404 - -
Alju06g0333 404 Pfam Ring finger domain 38 80 IPR001841 -
Alju06g0333 404 FunFam E3 ubiquitin-protein ligase RHF1A 25 92 - -
Alju06g0333 404 SMART ring_2 40 80 IPR001841 -
Alju06g0333 404 MobiDBLite consensus disorder prediction 184 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0333 Alju-ChrAlju06 2774171 2777218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0333 32 91 C3H Transcription Factor Family AT4G00335 46.667 6.48e-14 68.2