Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0324 ATGTCCCACATAACTGTGGAGAGGAACAGAAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGATCATTGACCCCATGTTTCTATATCAAGAGGGGAGATCAAGCATCTATAATAGGGGGAGTGATAGAGTTCATAAAGGAGTTACACCAAATAGTTCGAGTGTTGGAGTCCAAGAAAAGGAGGAAGAGTGTGAGCCCTAGTCCTCGTACGCGTGGTGGTGCTCCTATAACACTAGTTGATCATCAAGTTATTGATATTCCCTTTGGATCTGCTGATTCATTGAATAAGGAAATGGGAGGAGCAGTTAGGTGCAACTCTTCAGTTGCTGACGTGGAAGTCAAAATCGAAGGCCCCAATGTGATAGTGAAAGTGATCTCTCACAGGATTCCAGGTCAGCTTGCTAAGATCATAGCAGTTTTGGAAAGCCTTTCTTTTCAAGTTCTTCATCTCAACATCAGTACCATGGACGACACAGTTCTCCACCACTTCGTTGTCAAGATAGGACTGGATTGTCAACTAAGCCTGGAGGAACTAGCAATGGAAGTGCAACGAAGCTTCTCAGATGATGTTACCAGTAGTACTGCACCAATTAGCGCTTGA 603 0.4328 MSHITVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQIVRVLESKKRRKSVSPSPRTRGGAPITLVDHQVIDIPFGSADSLNKEMGGAVRCNSSVADVEVKIEGPNVIVKVISHRIPGQLAKIIAVLESLSFQVLHLNISTMDDTVLHHFVVKIGLDCQLSLEELAMEVQRSFSDDVTSSTAPISA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0324 200 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Alju06g0324 200 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Alju06g0324 200 Gene3D - 1 64 IPR036638 GO:0046983
Alju06g0324 200 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 66 IPR036638 GO:0046983
Alju06g0324 200 SMART finulus 4 55 IPR011598 GO:0046983
Alju06g0324 200 FunFam Transcription factor MUTE 1 66 - -
Alju06g0324 200 PANTHER TRANSCRIPTION FACTOR FAMA 1 187 IPR044283 GO:0003700|GO:0010052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0324 Alju-ChrAlju06 2663908 2665602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0324 1 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 63.033 1.40e-82 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju06g0324 HLH 1.3e-07 No_clan