Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0274 ATGTTTACTGTACTCTCTCTCTACTTTAGTATTTTTTCCCCTTACTGTAAATCACATGTTCATTGTGGTGTGATGAACTATTCTTTGAACACTAAACTTGAAAATTTGAATATGAGGAATGTCTTTTGTTGTGCGGCCATTTGTTTTCTTGGTCTCTGTGAAGATGCACTGTATACTCCAGAAAGTGGATCTTATATTATGAAACGAGGTTTCCTCTGCTCCGCCATGGACAACCATCGCCGTTCCCCAAGCGCTGAATCTGCTGAATTAGGAAAGGGGGACTCAAAAGAGAAGAAGACTTCTTCAAAAGGCAGAAGGGCCCGGTCTGTTCTTTATGGTTCCTGGAGAGGATTGGACTTGGAGTCTTTACGCACCAAAGAAGAAGGCACATCCGAGTGGTTTGCTAGTGCAGACATGCCTGAGGATTTCTGTAGAACTTTAAATTTTGAAGCTTCTTCTTCCAATGCCAGCACTTCTGACACAGAATGTCCGCTAGATACCGCAAATAATACTCAGTGGCGTATTATTCGTTTCATGAAAAAAGGATCTCACATGCGCTTCAATCATCCGCCTAAAAATATTCCCAAGCTCACCCGAAAAACAGTTAAACGGATTAAAGAAGACCTCATCCCTGGTCTACATTCTTCAGATTCAACCCCATCACTTGATCCAGATTCAACCCCATCTTTTAATCCAAAAGATCGAAATAATTTTCCCTTTAAGTCTTCATGGAAACATTATTCTTTTGCACAGCTCGAAGCTGCCACCAACAACTTCAGTGATGATATGTTGATTGGGAAGGGAGGTTATGCCGAGGTTTACAAAGGAAAAATGGAAGATGGGACATATGTTGCCATAAAAAAGCTGACAAGAGGAACCCAAGAAGAAATGACATCTGATTTCTTGTCTGAACTTGGTATTATAGTACATGTTGATCATCCCAATATTGCCAAATTGATTGGTTATGGTGTGGAAGGGGGCATGTTTCTTGTTCTTCAGTTATCTCCGCATGGCAGCCTCGCAGGCATACTTTATGGGCCTCGAGAGAGACTGGACTGGAACATCAGATTTAAGGTTGCTCTAGGGACTGCTGTGGGCCTTCAATATCTGCATGAGGGATGTCAAAAAAGGATCATCCACAGAGATATCAAGGCTGCCAATATTCTTCTGTCTGAGGATTTTGAGCCTCAGGTATCTGATTTTGGGCTTGCAAAGTGGTTACCTGGTCAGTTGTCTCACCATACTGTGGACAAAATTGAAGGCACATTTGGTTACCTTCCTCCCGAATTCTTCATGCATGGTATAGTAGATGAAAAGACCGATGTCTTCGCTTACGGAGTGCTGTTATTAGAGCTCATTACAGGAAGACAGGCTTTGGATAGCTCTCAGAAAAGTTTGGTGATGTGGGCAAAACCTTTGCTGTCTGTAGATAAAATCAAAGAGCTGGTAGACCCGTGTCTGAGTGATGCATACGATGAAGAACAGATGAAAATTGTTGTGATGACATCTTCCTTGTGTATAGAGCAGTCTTCAGTTGAGAGACCATATATGAGCGAGGTTGTGAAGACTCTTAAGGGAGAAGAAGGTGGATTGGAGTTCATAATGGAGCGCCAGAAGTCAAAACTGAGAAGGACATATTCTGAGGAGCTGCTAGATGCAGAGGATTACAATTCAACCAAGTACTTGAGTTTGAATGACTCGAGTCGAGAGACAAGCCCTGAGAGACCTGATTCTTTGAACGAAGAAACCACTCACAAGGAGGAATCCCCAAGGTCGCTTGCAAGAAATTCCCGCGGTGGTGGTGGTGGTGGTGGGTCCCTATTTTCTGCCACTCAAACTACAATAATTCCTCCAACTTCAACTCTCTCCTTTCTCTACTGGGTCACTCTAACCATGGAGGTGGGTCAGATTCAGAGACAGTGGGTCGACTGTATGAAATCCTTGTTCGTCGAGGGCTTCCTTGATGCTCAGTTCTTACAACTCAAGCAACTACAAGATGAGACCAACCCTGAATTTGTTGTTGAAGTTGTGTCCCTCTTCTTTGAAGATTCTGAGAGGCTTCTTACTGATCTCACCAATGCCCTAGATCAGAAAGCAATTGACTTCAAAAAAGTTGATGCTCATGTTCACCAGTTGAAGGGTAGCAGCTCAAGCATAGGTGCTCAAAGGGTAAAAAATGTCTGCATTGCTTTCCGCAGCTTTTGTGAGGAACAGAATGTAGATGCGTGCCTGAGATGTCTGCAACAAGTAAAGCAAGAGTACTTCCTTGTCAAAACTAAACTTGAAACTCTGCTTGGGCTTGAGCAACAGATTGTTGGAGCTGGTGGGTCAATCCCTATGATGGAGCTAAGTTTGTAA 2358 0.4313 MFTVLSLYFSIFSPYCKSHVHCGVMNYSLNTKLENLNMRNVFCCAAICFLGLCEDALYTPESGSYIMKRGFLCSAMDNHRRSPSAESAELGKGDSKEKKTSSKGRRARSVLYGSWRGLDLESLRTKEEGTSEWFASADMPEDFCRTLNFEASSSNASTSDTECPLDTANNTQWRIIRFMKKGSHMRFNHPPKNIPKLTRKTVKRIKEDLIPGLHSSDSTPSLDPDSTPSFNPKDRNNFPFKSSWKHYSFAQLEAATNNFSDDMLIGKGGYAEVYKGKMEDGTYVAIKKLTRGTQEEMTSDFLSELGIIVHVDHPNIAKLIGYGVEGGMFLVLQLSPHGSLAGILYGPRERLDWNIRFKVALGTAVGLQYLHEGCQKRIIHRDIKAANILLSEDFEPQVSDFGLAKWLPGQLSHHTVDKIEGTFGYLPPEFFMHGIVDEKTDVFAYGVLLLELITGRQALDSSQKSLVMWAKPLLSVDKIKELVDPCLSDAYDEEQMKIVVMTSSLCIEQSSVERPYMSEVVKTLKGEEGGLEFIMERQKSKLRRTYSEELLDAEDYNSTKYLSLNDSSRETSPERPDSLNEETTHKEESPRSLARNSRGGGGGGGSLFSATQTTIIPPTSTLSFLYWVTLTMEVGQIQRQWVDCMKSLFVEGFLDAQFLQLKQLQDETNPEFVVEVVSLFFEDSERLLTDLTNALDQKAIDFKKVDAHVHQLKGSSSSIGAQRVKNVCIAFRSFCEEQNVDACLRCLQQVKQEYFLVKTKLETLLGLEQQIVGAGGSIPMMELSL 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0274 785 Gene3D Phosphorylase Kinase; domain 1 231 333 - -
Alju06g0274 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
Alju06g0274 785 MobiDBLite consensus disorder prediction 83 101 - -
Alju06g0274 785 Pfam Protein tyrosine and serine/threonine kinase 264 524 IPR001245 GO:0004672|GO:0006468
Alju06g0274 785 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 636 771 IPR036641 GO:0000160
Alju06g0274 785 MobiDBLite consensus disorder prediction 214 235 - -
Alju06g0274 785 ProSiteProfiles Protein kinase domain profile. 259 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0274 785 ProSitePatterns Protein kinases ATP-binding region signature. 265 288 IPR017441 GO:0005524
Alju06g0274 785 Gene3D HPT domain 629 785 IPR036641 GO:0000160
Alju06g0274 785 MobiDBLite consensus disorder prediction 570 593 - -
Alju06g0274 785 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 236 334 - -
Alju06g0274 785 MobiDBLite consensus disorder prediction 562 611 - -
Alju06g0274 785 Gene3D Transferase(Phosphotransferase) domain 1 336 544 - -
Alju06g0274 785 PANTHER OS08G0249100 PROTEIN 112 558 IPR046958 -
Alju06g0274 785 SUPERFAMILY Protein kinase-like (PK-like) 244 546 IPR011009 -
Alju06g0274 785 MobiDBLite consensus disorder prediction 210 235 - -
Alju06g0274 785 Pfam Hpt domain 675 753 IPR008207 GO:0000160
Alju06g0274 785 CDD HPT 675 754 IPR008207 GO:0000160
Alju06g0274 785 FunFam Histidine-containing phosphotransfer protein 1 632 779 - -
Alju06g0274 785 MobiDBLite consensus disorder prediction 83 105 - -
Alju06g0274 785 SMART serkin_6 259 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0274 785 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 336 538 - -
Alju06g0274 785 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 669 768 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0274 Alju-ChrAlju06 2243168 2251363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0274 247 528 Receptor kinase-like Gene Family AT1G53420 42.759 2.76e-67 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Alju06g0274 PK_Tyr_Ser-Thr 5.6e-39 CL0016