Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0246 ATGACTGAAGGGAAGGTTGCGCCAGATCCAGTGGCAATTGATGCTCCTGGAGGGTTTCTTTTTGAGTGGTGGTCTGTATTCTGGGATATTTTTATTGCAAGGACAAACGAGAAACATTCCGAGTCTGCTGCAGCATATTTGGAGGCTCAACAGATTAAAGCAAAAGAACAGCAGCAGCTGCAAATGCAGCAGTTGCAACTTATGCGTCAGGCTCAGCTTCAAAGGAGGGATCCTAATCATCCTCCTCTTGGCGGTACTGTAAATGCTATTTCTTCTGAAGGAATGCTTGGGCAACCTACTGCCAGTGCATTGGCTGCAAAAATGTATGAGGAACGGATGAAACACTCTAACCCAATGGATACTGAGACATCCCAACCACTTATAGATGCTAGAATGGCCCTTTTGAAGTCAACAACAAGTCATCCTGGTCAGATTGTTCAAGGAAATACTGGAAGTGTGACTGCAGCTTTGCAGCACATGCAGGCTCGAAATCAGCAAACTCCTCAGGACATTAAAAGTGAACCCAGCATGGGCACAATGCAAAGATCTTTGCCCATGGATCCTTCTTCAATTTATGGGCAGGGAGCAATGCAGTCAAAACCAGGAATAGTAAATCCAGGAGTTGGTAATCTCACACTGAAAGGATGGCCTTTAACTGGCATAGATCAGATTCGACCAGGTTTAGGAGCACAAGTTCAAAAACCTCTCCTTCAAAGTGCAAATCAGTTCCAGCTTTTGCCCCAACAACAACAACAACAACTCTTGGCACAGGTTCAGGCACAAGGAAATATTACCAGTTCACCAATGTACGCAGATATGGATCCTCAACGGCTGAGGGGATTAGCTAGAGGTAGTTTGAATGCAAAAGATGGCCAACCTATTGCAAATGATGGATCAATTGGTTCTCCAATGCAATCCACTTCATCTAAGATCAACATGCCACAGATGCAACAATCTACCTCTCAGCAACAGCAGGATCCTTTGCACCCACAACAACTGCAGCAGAATAACCGGAAAAGGAAAGGGCCTACATCTTCAGGAGCTGCCAACAGCACTGGCACAGGAAACACGATTGGCCCTTCTAATTCCCAGCCATCAACCCCATCTACTCATACTCCTTGTGATGGAGTAGCCATGGCTGGTAACTTGCAGAATGTTGGTGGTGTATCCAAAGGTTTGATGATGTATGGTGCTGATGGCACAGGTGGTCTTGCATCGTCCACAAATCAACTGTTGCAGGATGACATGGAACGTTTTGGAGATGTTGGCTCCTTAGATGATAATGTGGAGTCATTTCTTTCACACGATGATGGTGATGGAAGAGATTTGTTTGGCACCTTGAAACGGAATGCTTCTGAGCACACAACAGATGCTTCAAAAGGCTTTTCCTTTAGTGAAGTCGGCTCCATACGCAAGAGCAATGGCAAAGTTGTTTGCTGTCACTTCTCAACAGATGGGAAGTTATTGGCCAGTGCTGGACATGACAAGAAGGTTTTTCTGTGGAACATGGAGACACTAAATACAGAGAGCACTTCAGAGGAACACACTCTTATTATTACTGATGTTCGCTTCAGACCAAATTCAACTCAGCTTGCAACTTCTTCATTTGATACAACTGTGCGGCTTTGGGATGCTTCAGATCCAAACTATTGTTTAAAGACATACACGGGTCATACCTCTCATGTGATGTCCCTTGATTTCCACCCAAAGAAAAATGACCTTTTCTGTTCTTGCGATGCCAACAGTGAAATTCGCTTTTGGAATATTAGTCAATATTCCTGCAATCGCATTTCCAAGGGAGGCTCTGCACAAGTGAGGTTTCAGCCAAGAGTAGGGCTTCGTCTGGCCGCAGCAGCTGGTAATGTTGTATCCCTCTATGATGTTGAGACTGACAGGCTGGTGCAGTCACTACAGGGGCACACCACAGATGTGCATTCTGTTTGTTGGGATAACAATGGAGATTACTTGGCGTCTGTGAGTCAAGAATCTGTCCGAGTGTGGTCATTGGCCTCTGGGGACTGCATTCACGAGCTTAGTTCTAGCGGGAACATGTTCAATTCTTGTGTTTTTCACCCAAGTTACTCCACTCTCTTGGTTATTGGAGGTTACCAGTCATTGGAGCTATGGAACATGGCAGAGAATAAATGCATGACAATACCAGCTCATGAGTGTGTGATATCGTCTTTAGCAGTATCAACAGTGTCAGGAATGGTTGCTTCTGCAAGTCATGACAAGTCCGTCAAGATTTGGAAGTGA 2256 0.4508 MTEGKVAPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSESAAAYLEAQQIKAKEQQQLQMQQLQLMRQAQLQRRDPNHPPLGGTVNAISSEGMLGQPTASALAAKMYEERMKHSNPMDTETSQPLIDARMALLKSTTSHPGQIVQGNTGSVTAALQHMQARNQQTPQDIKSEPSMGTMQRSLPMDPSSIYGQGAMQSKPGIVNPGVGNLTLKGWPLTGIDQIRPGLGAQVQKPLLQSANQFQLLPQQQQQQLLAQVQAQGNITSSPMYADMDPQRLRGLARGSLNAKDGQPIANDGSIGSPMQSTSSKINMPQMQQSTSQQQQDPLHPQQLQQNNRKRKGPTSSGAANSTGTGNTIGPSNSQPSTPSTHTPCDGVAMAGNLQNVGGVSKGLMMYGADGTGGLASSTNQLLQDDMERFGDVGSLDDNVESFLSHDDGDGRDLFGTLKRNASEHTTDASKGFSFSEVGSIRKSNGKVVCCHFSTDGKLLASAGHDKKVFLWNMETLNTESTSEEHTLIITDVRFRPNSTQLATSSFDTTVRLWDASDPNYCLKTYTGHTSHVMSLDFHPKKNDLFCSCDANSEIRFWNISQYSCNRISKGGSAQVRFQPRVGLRLAAAAGNVVSLYDVETDRLVQSLQGHTTDVHSVCWDNNGDYLASVSQESVRVWSLASGDCIHELSSSGNMFNSCVFHPSYSTLLVIGGYQSLELWNMAENKCMTIPAHECVISSLAVSTVSGMVASASHDKSVKIWK 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0246 751 MobiDBLite consensus disorder prediction 298 373 - -
Alju06g0246 751 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 719 751 - -
Alju06g0246 751 Gene3D - 607 751 IPR015943 GO:0005515
Alju06g0246 751 Gene3D - 439 606 IPR015943 GO:0005515
Alju06g0246 751 CDD WD40 466 751 - -
Alju06g0246 751 ProSitePatterns Trp-Asp (WD) repeats signature. 489 503 IPR019775 -
Alju06g0246 751 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 470 505 - -
Alju06g0246 751 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 751 IPR044716 GO:0003714
Alju06g0246 751 ProSiteProfiles Trp-Asp (WD) repeats profile. 512 544 IPR001680 GO:0005515
Alju06g0246 751 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 512 544 - -
Alju06g0246 751 ProSiteProfiles Trp-Asp (WD) repeats profile. 470 511 IPR001680 GO:0005515
Alju06g0246 751 SMART WD40_4 463 502 IPR001680 GO:0005515
Alju06g0246 751 SMART WD40_4 548 588 IPR001680 GO:0005515
Alju06g0246 751 SMART WD40_4 712 751 IPR001680 GO:0005515
Alju06g0246 751 SMART WD40_4 630 668 IPR001680 GO:0005515
Alju06g0246 751 SMART WD40_4 505 544 IPR001680 GO:0005515
Alju06g0246 751 SMART WD40_4 671 710 IPR001680 GO:0005515
Alju06g0246 751 ProSiteProfiles Trp-Asp (WD) repeats profile. 555 597 IPR001680 GO:0005515
Alju06g0246 751 Coils Coil 55 75 - -
Alju06g0246 751 Pfam WD domain, G-beta repeat 551 588 IPR001680 GO:0005515
Alju06g0246 751 Pfam WD domain, G-beta repeat 717 751 IPR001680 GO:0005515
Alju06g0246 751 Pfam WD domain, G-beta repeat 475 502 IPR001680 GO:0005515
Alju06g0246 751 Pfam WD domain, G-beta repeat 633 668 IPR001680 GO:0005515
Alju06g0246 751 Pfam WD domain, G-beta repeat 515 544 IPR001680 GO:0005515
Alju06g0246 751 PRINTS G protein beta WD-40 repeat signature 738 751 IPR020472 -
Alju06g0246 751 PRINTS G protein beta WD-40 repeat signature 531 545 IPR020472 -
Alju06g0246 751 PRINTS G protein beta WD-40 repeat signature 489 503 IPR020472 -
Alju06g0246 751 ProSiteProfiles Trp-Asp (WD) repeats profile. 719 751 IPR001680 GO:0005515
Alju06g0246 751 SUPERFAMILY WD40 repeat-like 464 751 IPR036322 GO:0005515
Alju06g0246 751 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 555 590 - -
Alju06g0246 751 MobiDBLite consensus disorder prediction 286 378 - -
Alju06g0246 751 ProSiteProfiles Trp-Asp (WD) repeats profile. 637 677 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0246 Alju-ChrAlju06 1982932 1990604 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0246 464 711 U-box Gene Family AT2G33340 28.947 4.31e-17 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Alju06g0246 WD40 0.0074 CL0186