Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0227 ATGGCTTCTTCTGTGAATCCCCCTCTCCTCTGTTTTCTGATTCTGTGCCTGCCTTCTGTTTGTGTGTTTGCCCAAACCAGAAGTAATATCAAAGTGGGCGATTCTTTCACCGCAGATGGCAACAACACCTCATGGGTGGTTTCACCTTCCGGGGATTTTGCCTTTGGGTTTCAACCACATAAAAACAACAGTTTCTTCTTACTCTCCATCTGGTATGCCAACATTCCAAGCATAACCATCGTTTGGCATGCCAATGGAGACAATCCTGCTCCAAAGGGGTCAAGGATTCAGCTTACTGCTTCAGAAGGGCTTAAGCTTACTTATCCTGATGGTCAAACTCTATGGACACCGGAAATTAGCCCTTCTGGTAGTGTTGCTTCTGGTTCTTTGACTGACTCTGGCAACTTTGTTCTTCATGATGGGACATCTAACTCTGTCTGGGAGACCTTCAAGAATCCTAAAGACACCATGTTACCCTCACAGACTTTGGAGAAGGGAGAAAAACTTTCCTCTCGGAGGTCAGAGGCGGATTTCGCACGGGGAACGTTTCAACTTGTTCTCCAGGATGATGGTAATCTTGTGTTGCATTCTGTAAACCTACCATCTGAGTATGCTAATGAAAATTATTTCGATACTGAAACTTTTGAGTCCAATAATTCAAGTCCTGGAATTCGACTAGTCTTCAACAAATCTGGAGAATTTTATGTTTTAAGGGAGAACAATGGTACATACACCTTCTCAGACCAGAGCTTACCCTCTCCAGCTCAATTTTATCTTCGAGCTACTCTTAATTTTGATGGAGTTCTCACTTTCTATCGACATCCTAAGGGTTCATCTGGAACTTGGACACCTATCTGGTCACAGCCAGATAATATCTGTCGTGCAACGCGCATCAGTGAAGGAACAGGCGTTTGCGGATATAATAGCATTTGTAGATTGGGTGATAATAGTAGGCCAAATTGTACATGCCCACAAGGTTATTCCCTACTAGATCCTGATGATCCATATGGTAGTTGTAAACCAGATTTCATACAGGGCTGTAAAGAAGATGAGCTTAGTCAAGGGAAAGATCTATATGACTTTGTGGAGTTGCAAGATACTGATTGGCCTCTCTCTGATTATGTGCTTCTAAGGCCTTTTACAGAAGATGAGTGCAAAAGGGCCTGCATGGAAGATTGTTTTTGTGCCGTTGCCATTTTCAGATTAGGTGACAGTTGCTGGAAAAAGAGGTTTCCACTTTCAAATGGCAGATATGACACGAGTCTTAATGGTGGTAAGGCTCTTCTCAAGGTGAGGAAAGACAATTCCTCCCTAATTGGTCCTCCTGGTCATCCAATCATCGAAAGAAAGAATCAGGACACTTTGATTTTGGCGGTTTCTGTCCTCTTGGGTAGCTCTGCCTTTCTTAATGTCGTATTAATTGGAGCATTCTGCCTAGGTTTTTCCTCCATTTACCAATTCAAGAAGCAGCTTAAAAATGTTTACCGAAGTGACAGTGCTGTTGAAAGCAATTTGCGCTGTTTTACTTATAAGGAGCTTGAAGAGGCCACAAATGGATTCAAGGAAGAGTTAGGAAGAGGAGCTTTTGCTGTTGTTTATAAAGGAGCCATTAACATGGGTTCTGCGGTAAACGTAGCAGTCAAAAGGTTGAACACCTTTCTTTTGCAAGAAACTGAGAAGGAATTCAAGAATGAAGTTAATGTCATTGGTCAGACCCATCACAAGAATTTAGTTCGGTTGCTTGGGTTCTGTGAGGATGGAACAGAAAGGATGTTGGTTTATGAGTATATGAGCAATGGCACACTAGCTAGCCTTATTTTCAGTGACTCAAAACCCAACTGGAACCTACGTCTAAAAATGGCATTTGGGATTGCAAGAGGACTTGTTTACTTACATGAAGATTGTAACACCCAGATCATCCACTGCGACATAAAGCCTCAAAACATACTCCTCGATGACTACTTTGATGCTCGTATCTCTGACTTTGGATTAGCCAAGCTCTTAAACATGAATCAGAGCCGAACCCATACAGCTATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAGAACATGCCTATCACGGCCAAAGTAGATGTCTATAGCTTTGGTATACTGCTGCTGGAAATAATCTGTTGCAGAAGAAGTGTGGACATGGAACCAGAGAATGAGGAGAGAGCAATATTAGCAGATTGGGCTTATGACTGCTACACAACAGGTTCTCTGGAAGCTTTGGTTGAAGAAGATCAGGAGGCACTAGATGACAAGAAGAACCTGGAAAATTTGGTAATGATTGCTATTTGGTGTATACAAGAGGACCCAACTCTTAGACCCACCATGAGAAAAGTTTCTCAGATGCTTGAAGGAGTTGCTGAAGTGCTTGCTCCACCATACCAGATCCCAAATAGTGTGACTACAGATCACTATTTATCACTCACTTTGGATGATTGA 2457 0.4237 MASSVNPPLLCFLILCLPSVCVFAQTRSNIKVGDSFTADGNNTSWVVSPSGDFAFGFQPHKNNSFFLLSIWYANIPSITIVWHANGDNPAPKGSRIQLTASEGLKLTYPDGQTLWTPEISPSGSVASGSLTDSGNFVLHDGTSNSVWETFKNPKDTMLPSQTLEKGEKLSSRRSEADFARGTFQLVLQDDGNLVLHSVNLPSEYANENYFDTETFESNNSSPGIRLVFNKSGEFYVLRENNGTYTFSDQSLPSPAQFYLRATLNFDGVLTFYRHPKGSSGTWTPIWSQPDNICRATRISEGTGVCGYNSICRLGDNSRPNCTCPQGYSLLDPDDPYGSCKPDFIQGCKEDELSQGKDLYDFVELQDTDWPLSDYVLLRPFTEDECKRACMEDCFCAVAIFRLGDSCWKKRFPLSNGRYDTSLNGGKALLKVRKDNSSLIGPPGHPIIERKNQDTLILAVSVLLGSSAFLNVVLIGAFCLGFSSIYQFKKQLKNVYRSDSAVESNLRCFTYKELEEATNGFKEELGRGAFAVVYKGAINMGSAVNVAVKRLNTFLLQETEKEFKNEVNVIGQTHHKNLVRLLGFCEDGTERMLVYEYMSNGTLASLIFSDSKPNWNLRLKMAFGIARGLVYLHEDCNTQIIHCDIKPQNILLDDYFDARISDFGLAKLLNMNQSRTHTAIRGTKGYVALEWFKNMPITAKVDVYSFGILLLEIICCRRSVDMEPENEERAILADWAYDCYTTGSLEALVEEDQEALDDKKNLENLVMIAIWCIQEDPTLRPTMRKVSQMLEGVAEVLAPPYQIPNSVTTDHYLSLTLDD 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0227 818 ProSitePatterns Protein kinases ATP-binding region signature. 524 548 IPR017441 GO:0005524
Alju06g0227 818 ProSiteProfiles Protein kinase domain profile. 518 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0227 818 SUPERFAMILY Protein kinase-like (PK-like) 500 790 IPR011009 -
Alju06g0227 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Alju06g0227 818 Pfam Protein tyrosine and serine/threonine kinase 520 789 IPR001245 GO:0004672|GO:0006468
Alju06g0227 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 179 272 IPR036426 -
Alju06g0227 818 CDD STKc_IRAK 524 791 - -
Alju06g0227 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 201 IPR036426 -
Alju06g0227 818 CDD B_lectin 47 153 IPR001480 -
Alju06g0227 818 PIRSF SRK 2 815 IPR024171 GO:0004674
Alju06g0227 818 ProSiteProfiles Bulb-type lectin domain profile. 32 151 IPR001480 -
Alju06g0227 818 FunFam S-receptor-like serine/threonine-protein kinase 487 596 - -
Alju06g0227 818 Gene3D Transferase(Phosphotransferase) domain 1 597 797 - -
Alju06g0227 818 SMART serkin_6 518 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0227 818 Pfam D-mannose binding lectin 79 166 IPR001480 -
Alju06g0227 818 Gene3D - 154 300 - -
Alju06g0227 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 151 - -
Alju06g0227 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 597 797 - -
Alju06g0227 818 SMART blect_4 36 153 IPR001480 -
Alju06g0227 818 CDD PAN_AP_plant 353 431 - -
Alju06g0227 818 Gene3D - 25 151 IPR036426 -
Alju06g0227 818 Coils Coil 744 764 - -
Alju06g0227 818 Gene3D Phosphorylase Kinase; domain 1 482 596 - -
Alju06g0227 818 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 800 - -
Alju06g0227 818 FunFam Serine/threonine-protein kinase 154 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0227 Alju-ChrAlju06 1845617 1848073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0227 504 810 Receptor kinase-like Gene Family AT1G60800 42.492 3.81e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju06g0227 PK_Tyr_Ser-Thr 5.7e-47 CL0016