Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0213 ATGGATTACAAGTTTCCCAAGATGGCAATCTCCAAGGAAAAAGAATTTTCAACTTGCTTTAAAGAAACGGCAATTGGATCAAATCCAATCATTAGAGGCTCTCAGACTCTCACTGCTGCTCATCACATTCATGTGGCAAGAGGGATGGATTCAATTTCATCAGAAAAGCTTCTTTCAATTTCAGATTCTACATCAACAATAGAAGAGCTGACAGGGGCCATTTTCACTAGTCTTCTCTCTCAAAGGTTCACTGATCAAGAGGAAATCACCCAAGCGCAACAGAAAAATCAATTCCTTTCTGAATTCAACCCTATCTGTACTCCTCCAAATGCTTCAACCTCAGGAGCCAGAGAGAGTTTCATTCCTCTAAATCTATTGGAAACACTTCCAGCATTACCAAAAGCAGACGCATCTGATGAGTCAGCTTCTCCAGCTTCTTCAACTGCTACCTCTAGATTTCCTTATTTGACATTGTTTCTGCAGGAGCCCTCAAGGTTATTTTCATCATCCTCAAAGGTCACTGAGTCGCCAGGCAAGCCAACAATTTCAGACACTTCATTTTCTGTGTCCCAGTGTCATGCAATTCAGAGCCAGGAAGTTAAGGCTCCACTCAAAATGAATCAGAATCTTAAAAACTTCAGATCCAAGTCTCTTAATGACTACTGCTTGAGCACCACCAAGACTCAGCCTATGAAGTATTCTGCTGGACGAGGCAAGCTGTTTAAGGGGGTGAGGCAAAGACATTGGGGGAAATGGGTTGCAGAGATTAGACTACCAAGGAATAGAACTAGGGTTTGGCTAGGAACATTTGACACAGCTGAAGATGCAGCCATGGCCTATGACACAGCTGCATACATACTTCGTGGAGAATATGCTCAACTCAACTTTCCAGATCTGAAGCATCATATTAAGGCCAATTCTTTGAATGGAACAACAGCCGCCCTACTCGAGGCAAAGCTTCAAGCAATATCACAAGGAATTTCTTCTCAAAGAGTGCCCACTGATTCCTTGCCAGGATCATTGGATAAGAACCCTGTTGAGAACGCCAAAATCAATGGTAAAAATCAGAATCCAGCTAAAAAAGAATGGCAGTTTGAGATACAGAACAAGGTTGGAGTTGATGAAAAAAACAATCATCAAGAGATATCGGACATGGAAGCTATTCAGTTGAGTAGAATGCCCTCCTTAGACATGGACATTATTTGGGATTCTCTTCTAGTCTCCGATTCATGA 1233 0.4201 MDYKFPKMAISKEKEFSTCFKETAIGSNPIIRGSQTLTAAHHIHVARGMDSISSEKLLSISDSTSTIEELTGAIFTSLLSQRFTDQEEITQAQQKNQFLSEFNPICTPPNASTSGARESFIPLNLLETLPALPKADASDESASPASSTATSRFPYLTLFLQEPSRLFSSSSKVTESPGKPTISDTSFSVSQCHAIQSQEVKAPLKMNQNLKNFRSKSLNDYCLSTTKTQPMKYSAGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAMAYDTAAYILRGEYAQLNFPDLKHHIKANSLNGTTAALLEAKLQAISQGISSQRVPTDSLPGSLDKNPVENAKINGKNQNPAKKEWQFEIQNKVGVDEKNNHQEISDMEAIQLSRMPSLDMDIIWDSLLVSDS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0213 410 ProSiteProfiles AP2/ERF domain profile. 240 297 IPR001471 GO:0003700|GO:0006355
Alju06g0213 410 Gene3D AP2/ERF domain 240 298 IPR036955 GO:0003700|GO:0006355
Alju06g0213 410 PRINTS Ethylene responsive element binding protein signature 263 279 IPR001471 GO:0003700|GO:0006355
Alju06g0213 410 PRINTS Ethylene responsive element binding protein signature 241 252 IPR001471 GO:0003700|GO:0006355
Alju06g0213 410 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 97 405 - -
Alju06g0213 410 SUPERFAMILY DNA-binding domain 240 298 IPR016177 GO:0003677
Alju06g0213 410 Pfam AP2 domain 241 289 IPR001471 GO:0003700|GO:0006355
Alju06g0213 410 SMART rav1_2 240 303 IPR001471 GO:0003700|GO:0006355
Alju06g0213 410 CDD AP2 239 299 IPR001471 GO:0003700|GO:0006355
Alju06g0213 410 FunFam Ethylene-responsive transcription factor 2 239 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0213 Alju-ChrAlju06 1683403 1684635 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0213 121 405 AP2-EREBP Transcription Factor Family AT4G13620 43.537 2.97e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju06g0213 AP2 4.1e-13 CL0081