Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0209 ATGCAGCTCAAGCATCTCTGCGTCATTTTACCTGCAGATTCTGCTGAGTTTAAGCAACACCCACCATCAAAAGTCAACCAATCTTCCCAGAAAGAAACCAAGACAAAGACAAAGAAACAACACAGGGCTTGTGGGGGTCAGGTTCTTGCCTTCTTTCGTGATTCTGTGAGCAAATTATATGGCACAAACTGTTCGAGGTTTTTCCACAATGAAGTGGGGAAAGGGAACCAAGGCTCAGTCATGCTGTTTCATGACATGGATGGAGTACAACTCTCTGCTAAGATTGGTGGGGACAGCCCAAGAATCTTCAGCTTCGCTGAGCTTTTCATAGGGTCTAATGGTTTCAGTGAGGATCATGTTCTGGGAAGTGGAGGATTTGGGAGAGTGTACAAGGCTGTTTTGCCCAGTGATGGAACAGTGGTTGCTGTCAAATGTTGCTTAGCAGAGAAAGGCCAGCAATTTGAGAAGACTTTTGCTGCTGAGTTAGCAGCCGTGGCTCATCTTCGACACAAGAACCTTGTCAGGCTCAGGGGTTGGTGTGTTCATGAAGATCAGTTGTACCTTGTCTATGATTACATGCCTAACCTCAGCCTTGACCGTATACTCTTTCGCCGGCCGGAGAGTCCAAACGCTGAGTCTCTCAGCTGGGGAAGGCGTGGGAAGATTATCAAAGGCTTGGCAGCTGCATTGTACTATCTTCATGAGCAGCTAGAGAATCAGATCATTCACAGGGATGTGAAAACCAGTAATGTGATGCTTGATTCCCAGTACAATGCCCGGTTGGGTGACTTTGGCTTGGCAAGGTGGCTAGAACATGAGCTTGAGTATAATAACAATCAAAGTAGGAAAACTTCAACCAAAATTGACCCTTTCAGGTTAGCTGAGACAACGAGAATTGGTGGCACAATTGGGTATTTGCCCCCCGAGAGTTTCCAGAAGAAAAGCATCGCTACCTCGAAATCTGATGTGTTCAGCTTCGGTATAGTTGTGCTGGAAGTGGCATCTGGAAGGAGAGCTATTGATCTTGCATACCCTGATGATAAGATCATTTTGCTTGACTTTGTTAGGAGGCTATCTGATGAAGGGAAGCTCCTAGCAGCAGGCGATTCTCGGCTACCAGATGGTTCCTACAATCTTTCTGATATGGAACATTTACTTCACATAGGCCTTCTTTGTACACTCCATGAACCACAATCAAGGCCTAGCATGAAATGGATTGTAGAAGCACTTTCTGACATTTCAAGCCCATTACCAGCTCTTCCTTCTTTCCATTCCCACCCTTTATATATTACTTTATCTTCTCCATCTGATACAAGTCTAAGCAGCACAAATGCCTCCAGCACTGTCAACACAGAAAATGTCAGCATAATCACCAACTATTCTTCATCCAACTATGTTACAGCAAATGGGAGGACAATATACATGACTGCTGAAGATAGAAACAGCGGAATCTCCTCCGCAAAGTGCATGTATCACCACAACACATCATTTCCTGTGGTTGAAGCTCCGAGGGAGATATCATACAAGGAGCTTGCCATGGCTACAGATCATTTTTCTGAGTCTAGGAAAGTAGCAGAGCTGGACTTTGGAACTGCTTACCATGGCGTCCTTGGAGATCGTTGCCATGTCATGGTGAAACGCCTTGGAATGAAGACTTGCCCTGCGCTGCGCGAAAGATTCTCTAATGAACTGCGAAATCTAGCAAGGCTTCGCCACAGGAATTTGGTGCAGCTTCGAGGTTGGTGTACCGAGCAAGGGGAAATGCTTGTTGTGTATGATTACTCTGCAACAAGACTTCTCAGTCACCATCTTCTCCATGATAACAATCTTAGAGATGGGAGTTCTGTCCTGAAATGGCATCACAGATACAACATAATAAAATCACTAGCTTCTGCCATTCTTTACCTTCATGAGGAATGGGAAGAACATGTAATTCATAGGAACATCACTTCTTCAGCTGTTGTCCTTGAGCCTGATATGAACCCAAGACTCAGCAGTTTTGCCCTGGCTGAATTTCTGACCCGGAATGAGCATGGGCATCATGTAGTCAAAGACACCAGCAAATCGGTTCGAGGGATTTTCGGCTACATGTCACCGGAATATATGGAATCCGGCGAAGCTACCTCTGCTGCTGATGTTTACAGTTTTGGTGTGGTGATGCTTGAAGTTATCAGTGGACAGATGGCGGTGGACTTCCGGCAGCCTGAGGTGCTATTGGTGAAGAAGATTCATGAATTTGAGACAAGAAAAAGACCACTGGAGAATTTAGCAGACATAAGGCTCAATGGAGAGTACAATCACAAAGAACTGATGAGATTGGTGAAGCTAGGGATTGCATGCACCCGGTCTGACCCAAAGTTAAGACCAAACATGAGACAAATAGTGAGCATCCTTGATGGAAATGACAGACTGATCATGGAAAAAAACCAGAAAGAGAGCACAGAAGAATGGAAAGAAAGGAATGCTTATTCATTGTCACTGATCAGGAGAATCCAAGCTCTAGGAATCCGTTGA 2514 0.4503 MQLKHLCVILPADSAEFKQHPPSKVNQSSQKETKTKTKKQHRACGGQVLAFFRDSVSKLYGTNCSRFFHNEVGKGNQGSVMLFHDMDGVQLSAKIGGDSPRIFSFAELFIGSNGFSEDHVLGSGGFGRVYKAVLPSDGTVVAVKCCLAEKGQQFEKTFAAELAAVAHLRHKNLVRLRGWCVHEDQLYLVYDYMPNLSLDRILFRRPESPNAESLSWGRRGKIIKGLAAALYYLHEQLENQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELEYNNNQSRKTSTKIDPFRLAETTRIGGTIGYLPPESFQKKSIATSKSDVFSFGIVVLEVASGRRAIDLAYPDDKIILLDFVRRLSDEGKLLAAGDSRLPDGSYNLSDMEHLLHIGLLCTLHEPQSRPSMKWIVEALSDISSPLPALPSFHSHPLYITLSSPSDTSLSSTNASSTVNTENVSIITNYSSSNYVTANGRTIYMTAEDRNSGISSAKCMYHHNTSFPVVEAPREISYKELAMATDHFSESRKVAELDFGTAYHGVLGDRCHVMVKRLGMKTCPALRERFSNELRNLARLRHRNLVQLRGWCTEQGEMLVVYDYSATRLLSHHLLHDNNLRDGSSVLKWHHRYNIIKSLASAILYLHEEWEEHVIHRNITSSAVVLEPDMNPRLSSFALAEFLTRNEHGHHVVKDTSKSVRGIFGYMSPEYMESGEATSAADVYSFGVVMLEVISGQMAVDFRQPEVLLVKKIHEFETRKRPLENLADIRLNGEYNHKELMRLVKLGIACTRSDPKLRPNMRQIVSILDGNDRLIMEKNQKESTEEWKERNAYSLSLIRRIQALGIR 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0209 837 Pfam Protein tyrosine and serine/threonine kinase 522 798 IPR001245 GO:0004672|GO:0006468
Alju06g0209 837 MobiDBLite consensus disorder prediction 18 39 - -
Alju06g0209 837 SUPERFAMILY Protein kinase-like (PK-like) 99 444 IPR011009 -
Alju06g0209 837 SMART serkin_6 518 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0209 837 SMART serkin_6 115 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0209 837 CDD STKc_IRAK 529 800 - -
Alju06g0209 837 Gene3D Phosphorylase Kinase; domain 1 481 594 - -
Alju06g0209 837 Pfam Protein kinase domain 116 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0209 837 Gene3D Phosphorylase Kinase; domain 1 88 192 - -
Alju06g0209 837 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Alju06g0209 837 ProSiteProfiles Protein kinase domain profile. 518 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0209 837 FunFam Receptor like protein kinase S.2 596 822 - -
Alju06g0209 837 SUPERFAMILY Protein kinase-like (PK-like) 495 798 IPR011009 -
Alju06g0209 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Alju06g0209 837 Gene3D Transferase(Phosphotransferase) domain 1 600 824 - -
Alju06g0209 837 Gene3D Transferase(Phosphotransferase) domain 1 193 417 - -
Alju06g0209 837 ProSiteProfiles Protein kinase domain profile. 115 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0209 837 PANTHER - 81 412 - -
Alju06g0209 837 FunFam Receptor like protein kinase S.2 193 416 - -
Alju06g0209 837 FunFam Receptor like protein kinase S.2 89 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0209 Alju-ChrAlju06 1656046 1658559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0209 508 801 Receptor kinase-like Gene Family AT3G53810 37.124 1.15e-52 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju06g0209 PK_Tyr_Ser-Thr 4.5e-30 CL0016