Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0194 ATGAGAACCATAAGGAACATTTTGGGGTTCAGCAGCAGAGAACCTGTCTCTTCTTTTAGAAATATCATCATGTCTCGGTCAGATGAATCGCCTGTTTTTAGCAAACCCAGATCGGTACTCAAGAAGGTGCTTGCCAGAAATGTAAATCCTGGAAGTCGTCTAATGGTGAACAAGAACATTGCAAGTGAGTTCAAGGGTTTGGATCCTTTTCTGAATCTGGATCACTTTTCAGTGACTCACCCTGTAGGATTCACTGATCATCCGCATAGAGGGTTTGAGACAGTCACCTATATGCTAGAGGGAGCATTAGTTCATCAAGATTTTATTGACAATAAAGGAACAATAAGAGCTGGTGATGTTCAATGGATGTCTGCAGGCAGAGGGATCATTCACTCTGAGATGCCTGCAGGAGTGGGTACACACACAGGAGTGCAGCTATGGATCAATCTTTCCAAGAAAGACAAAATGATGGAACCAAGCTATCAAGATCTGCTGAAGGAAAACATTCCAAGAGCAGAGAAAGATGGGGTTGAAGTAAAAGTGATAGCAGGTAAAGCATTAGGGGTTGAATCAGATACATACACAAGAACTCCAGCCATGTTTCTTGATTTCAAGCTGAACCCACAAGCCCAAGTGCACCACAACATTCCAGAGACTTGGAATTCCTTTGTGTATGTGCTTGAAGGAGAAGGAGTGTTTGGGTCCCCAAGCTCATCACCAATTGGACCTTCCAATGTGGTGTTCTTGGGGCTTGGAGATGGTGTGAGCGTGTGGAACAAATCTTCTGAGCCACTGAGATTTCTGCTCATAGCCGGCGAGCCATTGAACGAGCCAGTGGCTAAGTATGGTCCTTTTGTGATGAACACACAGTCTGAGATTGAGGAGGCCATGGAGGATTTTCATCACAGTAAGAATGGTTTTGAGAATGGCGGACATTGGAGGTCTCAGTGA 951 0.4458 MRTIRNILGFSSREPVSSFRNIIMSRSDESPVFSKPRSVLKKVLARNVNPGSRLMVNKNIASEFKGLDPFLNLDHFSVTHPVGFTDHPHRGFETVTYMLEGALVHQDFIDNKGTIRAGDVQWMSAGRGIIHSEMPAGVGTHTGVQLWINLSKKDKMMEPSYQDLLKENIPRAEKDGVEVKVIAGKALGVESDTYTRTPAMFLDFKLNPQAQVHHNIPETWNSFVYVLEGEGVFGSPSSSPIGPSNVVFLGLGDGVSVWNKSSEPLRFLLIAGEPLNEPVAKYGPFVMNTQSEIEEAMEDFHHSKNGFENGGHWRSQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0194 316 CDD cupin_pirin_C 198 274 - -
Alju06g0194 316 Pfam Pirin C-terminal cupin domain 201 305 IPR008778 -
Alju06g0194 316 Gene3D Jelly Rolls 170 275 IPR014710 -
Alju06g0194 316 Pfam Pirin 62 148 IPR003829 -
Alju06g0194 316 Gene3D Jelly Rolls 62 301 IPR014710 -
Alju06g0194 316 PANTHER PIRIN-RELATED 24 315 IPR012093 -
Alju06g0194 316 CDD cupin_pirin_N 63 150 - -
Alju06g0194 316 PIRSF Pirin 35 314 IPR012093 -
Alju06g0194 316 SUPERFAMILY RmlC-like cupins 62 314 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0194 Alju-ChrAlju06 1499059 1500679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0194 34 308 Calmodulin-binding Proteins AT3G59220 57.554 3.71e-108 315