Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0193 ATGAGAGCCATCAAGCACAGCTTTTCACTGTTCAATTGCCGTCCTTCTTCTTCGTCTTCTTCCACCGCCTCTGTGCTTTCATCTCTCCCAACTATCATGTCACAATCAGATCAATCTTCGCCTTTCGAATCGCCCAGACTGGTTCTCAAGAAGGTCTTGGCCAAATCTCAACACGAAGGTGACGGCGCTGTTGTTCGAAGAGCCCTCGGAAGGAGCGAGTTGAAGAGTTTGGATCCTTTTCTGATGATGGATCACTTCTCAGTGTCTCCACCAGGAGGTTTCCCAGACCATCCACACAGAGGTTTTGAAACTGTCACATACATGCTGCAGGGAGCCATAACTCATCAAGATTTTGCTGGGCATAAGGGTACAATAAGAACAGGCGATGTCCAGTGGATGACCGCAGGCAGAGGAATAATTCACTCTGAAATGCCTGGAGGAGAAGGAACCCACAAGGGATTGCAGCTCTGGATCAATCTATCTTCCAAAGACAAGATGATTGAGCCAAATTATCAAGAACTTCCAAAAGAGGACATACCAGTAGCAGAACAAGATGGGGTTGAAGTGAAAGTTGTAGCAGGAGAAGCAATGGGAGTTTATTCACCAGTTTACACTAGAACCCCAACCATGTTCCTTGATTTCTCAGTCAACCCAGGAGCTGAATGGCATCAGAAGATTCCAGAATCATGGAACGCCTTTGTTTATGTGATTGAAGGAGAAGGGGTTTTTGGGTCACTGAGTTCTTCACCAGTGGCAGCTCACAATGTGCTGGTCTTGACTCTTGGAGATGGCCTAAGTTTGTGGAACAGATCTTCAAAGCCTCTGAGGTTTGTGTTAATTGCAGGCCAGCCACTAAATGAACCAGTGGTTCAGTATGGACCCTTTGTGATGAACACACAGTCTGAGATTGAAAAGACCATAGAGGACTATCAATATTGCAAGAATGGATTTGAGATGGGGAGATATTGGAGATCTCAACAGTAA 984 0.4573 MRAIKHSFSLFNCRPSSSSSSTASVLSSLPTIMSQSDQSSPFESPRLVLKKVLAKSQHEGDGAVVRRALGRSELKSLDPFLMMDHFSVSPPGGFPDHPHRGFETVTYMLQGAITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPGGEGTHKGLQLWINLSSKDKMIEPNYQELPKEDIPVAEQDGVEVKVVAGEAMGVYSPVYTRTPTMFLDFSVNPGAEWHQKIPESWNAFVYVIEGEGVFGSLSSSPVAAHNVLVLTLGDGLSLWNRSSKPLRFVLIAGQPLNEPVVQYGPFVMNTQSEIEKTIEDYQYCKNGFEMGRYWRSQQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0193 327 CDD cupin_pirin_C 208 284 - -
Alju06g0193 327 FunFam pirin 59 196 - -
Alju06g0193 327 Gene3D Jelly Rolls 180 285 IPR014710 -
Alju06g0193 327 Pfam Pirin C-terminal cupin domain 211 316 IPR008778 -
Alju06g0193 327 SUPERFAMILY RmlC-like cupins 46 324 IPR011051 -
Alju06g0193 327 Gene3D Jelly Rolls 59 311 IPR014710 -
Alju06g0193 327 CDD cupin_pirin_N 63 160 - -
Alju06g0193 327 Pfam Pirin 65 158 IPR003829 -
Alju06g0193 327 PANTHER PIRIN-RELATED 33 326 IPR012093 -
Alju06g0193 327 PIRSF Pirin 44 324 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0193 Alju-ChrAlju06 1495741 1497373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0193 45 321 Calmodulin-binding Proteins AT3G59220 64.158 7.71e-132 375