Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0190 ATGTACCCTTCTTCCTCATCGTCCTCATCCCAGTCCCAAAGCGGCTTAACCCGCTACGGTTCCGCCCCGGGCTCACTCCTCACCAACGCCGTCGATGCCGTTATCGGAGGAGCTGACCGCGAATTCTCCACTACCGCCGTCGGATCACGCCCTCCAGTCACCCATTTCTTCACCGGCGAATCCTCCGAGTCCTCCTGCAAGGTCAACAGCCAATCCTCCGATCCAAAAGACCAGCAGCCTCCCAGGCTCGGTTTGCAGAGATCGTACGGTCTTCCTCCTGACGGAGCCGCCATCGGCTTCGGCATCTCCTCTTCGGCTTTGCTTCGTCAGAGAAGCTCGCCAGCTGGCTTCCTCAGCCATCTCACCGCTACTCCACCTGATAGTGGAGGTTTCTCAATTTCAAGAGGTAGTGGAAGCTACAGCGCACAAGGCGCCTCCAATAGTGGCCATGGGATGTCAAGGCTAAAATCTCAATTGAGCTTCACAGGGCAAGAATCTCTTTCACAGATATCGGAGGTGAGCGAACATGTTGATGGCATCAATTCTGACAATGGCCACCATAGAACTACACATTCTTATGCCACAACCAGCTTTGGAATGGACACCTGGGATGGTTCAAATTCCATTGTGTTTTCTTCTCCCTCTAGTAAACGCGCTAAGACTATAGATGGAGACATTCTGAACTGCATCAATGCCTTGGAATCTCAGTTTAGTCTGCCACAAACAACTCTGGAAATGGCAACAGTGGAGAAGCTACTTCATCATATTCCTGAAGATTCTGTCCCTTGCAAAATTCGTGCTAAGCGAGGCTGTGCTACTCATCCAAGAAGCATTGCAGAACGGGAGAGAAGAACTAGAATTAGTGGGAAGCTGAAGAAGTTGCAAGAGCTAGTGCCTAATATGGATAAGTCATGCAATGAGATACATGATTTGAGCAAACAAGCTATGCGGACATGCTGGATTTGGCTGTTCAACATATCAGAGGTCTACAAACTCAAGTTCAGAAGCTCCACAAAGAACTCGAGAATTGCACCTGTGGATGTAAACAAAGCTCATAGTATTTGTCTTGACGAGGATGCAGCGGAAGAAAGTGGATGGATAGAGTTCATGGATTCTGATGCCAAAGTATCGACTGATTTTGTACCTTACCAACTTTAA 1158 0.4888 MYPSSSSSSSQSQSGLTRYGSAPGSLLTNAVDAVIGGADREFSTTAVGSRPPVTHFFTGESSESSCKVNSQSSDPKDQQPPRLGLQRSYGLPPDGAAIGFGISSSALLRQRSSPAGFLSHLTATPPDSGGFSISRGSGSYSAQGASNSGHGMSRLKSQLSFTGQESLSQISEVSEHVDGINSDNGHHRTTHSYATTSFGMDTWDGSNSIVFSSPSSKRAKTIDGDILNCINALESQFSLPQTTLEMATVEKLLHHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKSCNEIHDLSKQAMRTCWIWLFNISEVYKLKFRSSTKNSRIAPVDVNKAHSICLDEDAAEESGWIEFMDSDAKVSTDFVPYQL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0190 385 MobiDBLite consensus disorder prediction 43 90 - -
Alju06g0190 385 MobiDBLite consensus disorder prediction 47 79 - -
Alju06g0190 385 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 274 308 IPR036638 GO:0046983
Alju06g0190 385 Gene3D - 274 348 IPR036638 GO:0046983
Alju06g0190 385 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 23 303 - -
Alju06g0190 385 MobiDBLite consensus disorder prediction 118 152 - -
Alju06g0190 385 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0190 Alju-ChrAlju06 1472000 1477959 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0190 15 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 44.957 9.40e-69 219