Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0178 ATGACACAGGCTTTAACCACTGCTTTTTTGCTGAAAGAGAAGGAAGAGGAACCGGTTACAGCAAACCGGTTAGAGGCTGCCGATACAGTGGTGGACGTTGGGGGCTCAGACTGTTTGGTCGGTCTAGAATGCTTTCTGAACATTGTCAGGGCACTGGGATTGGGATCATGCCTCTCTGTGGCCCATCCCCTCCCTTATTCGCCGGAATCCACTTCAGAAAGTGCGAAGCGAAGGAGGAGATTAAGGAGCAGCTCTTCGTTTGATTATAAAACGGAATTGGGCCTACATAAAATCCCTGGGAGAATGTTCGTAAATGGATCCAGTGAGGTTGCGTCCCTCTTTTGTAAGCAAGGCAAAAAAGGGATCAACCAGGACGCCATGCTTGTTTGGGAGAACTTCTGTACAAAGGACACCATTTTTTGTGGAGTTTTTGATGGCCATGGTCCTAGTGGTCATAGGGTAGCAAAGAGAGTCAGGGATTCCTTCCCTTTAAAGCTTATTGCCCAATGGGAATTGCATCGTAATAATAAGGATGGACTAAGTGATAATAGAAATCCTATGGCAAACCATAAATCAGAGGATATTGGACTTACAATGGTTGGTGAGAAATCTAGTGTTACCGATCAAGAGCACAACGGTACTAATACTATGAAGGCGCTGAAGGAATCTTTGCTGAAGGCTTGCAAGATTATAGACAAGGAACTGAAACTGCATCCTGATATTGATTGCTTTTGCAGTGGCACAACAGCAGTCACCTTGGTCAAACTGGGGCAGGATCTTGTTATTGGAAATGTTGGGGATTCAAGAGCTATACTGGGTACTAGGGATCATGATAATTCTCTTATTGCTGTTCAGTTGACCATTGACTTGAAGCCAAATCTTCCAAGGGAAGAAGAGAGAATCAAACGGTGTAGAGGACGTGTATTTGCTCTTCGCAATGAACCTGAGGTTGCTCGAGTTTGGCTGCCCAATGCTGACTCCCCAGGCCTTGCTATGGCACGAGCTTTTGGAGATTTTATTCTTAAAGACTTTGGTCTGATATCTGTTCCTGATGTCTCCCATCACCACCTTACTGAGAAGGATGAATTTGTTGTATTAGCCACAGATGGGATTTGGGATGTTTTGTCAAACCAAGAAGTTGTAGACATTGTGGCATCTGTGTCACGCTCTTTCGCAGCTCGAACACTTGTTGAGACCGCTGTTCGAGCATGGAGGACAAAGTACCCGACTTCAAAAGTTGATGATTGTGCTGTAGTGTGTCTCTTTTTTGATTCAGATTCGGACTTAAAGACAGTTTACTCCACAGACAAGGAGATGCCCGAGGCATCGACTAATCACCAATCTGAGGGATCTGCTCCTGAAACTGGAGTTAACTGTTCAGAAAAATCTATTGCTTCCCCTGAGAATTTTCCTATGCTTGGGAAGAAAGGAGATGGAGTAGAAGCTGTACAGCAGTAG 1458 0.4486 MTQALTTAFLLKEKEEEPVTANRLEAADTVVDVGGSDCLVGLECFLNIVRALGLGSCLSVAHPLPYSPESTSESAKRRRRLRSSSSFDYKTELGLHKIPGRMFVNGSSEVASLFCKQGKKGINQDAMLVWENFCTKDTIFCGVFDGHGPSGHRVAKRVRDSFPLKLIAQWELHRNNKDGLSDNRNPMANHKSEDIGLTMVGEKSSVTDQEHNGTNTMKALKESLLKACKIIDKELKLHPDIDCFCSGTTAVTLVKLGQDLVIGNVGDSRAILGTRDHDNSLIAVQLTIDLKPNLPREEERIKRCRGRVFALRNEPEVARVWLPNADSPGLAMARAFGDFILKDFGLISVPDVSHHHLTEKDEFVVLATDGIWDVLSNQEVVDIVASVSRSFAARTLVETAVRAWRTKYPTSKVDDCAVVCLFFDSDSDLKTVYSTDKEMPEASTNHQSEGSAPETGVNCSEKSIASPENFPMLGKKGDGVEAVQQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0178 485 SMART PP2C_4 104 421 IPR001932 -
Alju06g0178 485 Gene3D - 105 425 IPR036457 -
Alju06g0178 485 MobiDBLite consensus disorder prediction 436 485 - -
Alju06g0178 485 CDD PP2Cc 110 423 IPR001932 -
Alju06g0178 485 ProSiteProfiles PPM-type phosphatase domain profile. 110 423 IPR001932 -
Alju06g0178 485 Pfam Protein phosphatase 2C 206 402 IPR001932 -
Alju06g0178 485 SUPERFAMILY PP2C-like 110 424 IPR036457 -
Alju06g0178 485 MobiDBLite consensus disorder prediction 437 465 - -
Alju06g0178 485 PANTHER PROTEIN PHOSPHATASE 85 421 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0178 Alju-ChrAlju06 1362826 1365664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0178 54 425 PP2C-type Phosphatase Gene Family AT3G02750 56.744 1.84e-152 443