Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0153 ATGGGCAACGAAGACGAAGATATGGGGATTCCAGAGGATGACTCTGTTAGCCCAATTCTCAAGGTCGGAGAGGAGAAGGAGATAGGAAAGAATGGCCTGAGGAAGAAGTTGGTTAAGGAGGGGCGAGGATGGGAGACTCCAAAAGCTGGAGACGAGGTAGAAGTTCACTACACCGGGACATTGTTGGATGGAACTCAGTTTGATTCTAGCCGTGAGAGAGGAACCCCATTTAAGTTCAAACTTGGGCAAGGGCACGTAATAAGGGGATGGGATGAAGGCATCAAAACCATGAAGCTAGGTGAAAACGCCATTTTCACAATACCTCCAAAGTTGGCTTATGGAGAGTCTGGATCACCTCCGACTATTCCCCCTAATGCAACCCTAATATTTGATGTGGAGTTGCTGTCTTGGACCAGTGTGGATGACATAACCAGGGATGGGGGTATCTTGAAAAAAATCCTCTGCGAAGGAGAGAGTTGGGAAAAACCTAAGGACCTAGATGAAGTATCTGTTAAGTATGAAGCCAGACTCGATAATGGGACCGTCATTTCTAAATCTGATGGTGTGGTGTTTACCGTGGAAGATGGCTATTTTTGTCCTGCTTTGGCTAAGGCTGTGAAAACAATGAAGAAAGGAGAGAAAGTCCTTTTGACTGTGAAGCCACGATATGCATTTGGCGAGAATGGGAGGCCAGCATCTGGTGACGAAGGTGCTGTACCCCCTAATTCATCACTCCAAATTAATCTTGAATTGATAACTTGGAAGACTGTAACTGACATTACTAAGGATAAGAAAGTTGTCAAAAAGACTTTGAAGGAAGGGGAGAAATATGAACGACCAAATGATGGATCTGTTGTCCAAGTGAGACTTATTGGCAAGCTGCAAGATGGGACTGTCTTCACCAAGAAGGGTTATGATGAGGAGCAACCATTCGAGTTCAAAGTAGATGAAGGGCAAGTAATTGAGGGACTCGACGAAGCCGTGAAGAACATGAAGAAAGGGGAAATTGCATTGGTGACCATACAACCTGAATATGCCTTTGGCGCCTCTGGCTCTCCCGAAGAATTTGCTCATGTTCCTCCTAATTCAACTGTATACTATGAAGTTGAGCTGATTTCATTTCAGAAGGAAAAGGACTCATGGGAGATGAACACAACAGAGAAGATTGAGGCAGCTGGAAAGAAAAAGGAAGAAGGGAACGCATGGTTCAAGGCTGGTAATTATGATAGAGCAACGAGGAGATATAAGAAGGCCATGAGGTTTATTGAGTTTGACTCCAGTTTTACTGATGAGGAGAAGCAGCAGACTAAGGCACAGAAAATCTCAATCAACCTCAATAATGCTGCCTGCATGCTGAAGCTTAAAGACTACAAGGAAGCAGTGAAGTTGTGCACAAAGGTATTAGAGCTTGATGGTGGGAATGTGAAAGCTCTATACCGGAGGGCACAAGCATATATTCAACTTGTGGATTTGGACCTTGCTGAAATGGACATCAAGAAGGCGCTTGAAATAGAGCCAGACAATAGGGAGTTGAAAGTGGAGTACAAAATATTGAAGGAGAAAGTGAGAGAATACGACAAGAAGGATGCACAGTTCTATGGCAGCATATTTGCGAAAATGAACAAGCTTGAACAAACTGGAAGAGCAAATGCAGCAGCAAAAACACAGCACGTGCCTATGACTGTCAATAGCAAAGCATGA 1701 0.4409 MGNEDEDMGIPEDDSVSPILKVGEEKEIGKNGLRKKLVKEGRGWETPKAGDEVEVHYTGTLLDGTQFDSSRERGTPFKFKLGQGHVIRGWDEGIKTMKLGENAIFTIPPKLAYGESGSPPTIPPNATLIFDVELLSWTSVDDITRDGGILKKILCEGESWEKPKDLDEVSVKYEARLDNGTVISKSDGVVFTVEDGYFCPALAKAVKTMKKGEKVLLTVKPRYAFGENGRPASGDEGAVPPNSSLQINLELITWKTVTDITKDKKVVKKTLKEGEKYERPNDGSVVQVRLIGKLQDGTVFTKKGYDEEQPFEFKVDEGQVIEGLDEAVKNMKKGEIALVTIQPEYAFGASGSPEEFAHVPPNSTVYYEVELISFQKEKDSWEMNTTEKIEAAGKKKEEGNAWFKAGNYDRATRRYKKAMRFIEFDSSFTDEEKQQTKAQKISINLNNAACMLKLKDYKEAVKLCTKVLELDGGNVKALYRRAQAYIQLVDLDLAEMDIKKALEIEPDNRELKVEYKILKEKVREYDKKDAQFYGSIFAKMNKLEQTGRANAAAKTQHVPMTVNSKA 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0153 566 FunFam Peptidylprolyl isomerase 256 377 - -
Alju06g0153 566 ProSiteProfiles TPR repeat profile. 475 508 IPR019734 GO:0005515
Alju06g0153 566 Gene3D Tetratricopeptide repeat domain 378 535 IPR011990 GO:0005515
Alju06g0153 566 SUPERFAMILY FKBP-like 259 392 - -
Alju06g0153 566 FunFam Peptidylprolyl isomerase 142 255 - -
Alju06g0153 566 Gene3D - 142 255 IPR046357 GO:0003755
Alju06g0153 566 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 278 372 IPR001179 GO:0003755
Alju06g0153 566 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 161 252 IPR001179 GO:0003755
Alju06g0153 566 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 44 135 IPR001179 GO:0003755
Alju06g0153 566 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 166 255 IPR001179 GO:0003755
Alju06g0153 566 FunFam Peptidylprolyl isomerase 380 535 - -
Alju06g0153 566 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 138 IPR001179 GO:0003755
Alju06g0153 566 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 283 375 IPR001179 GO:0003755
Alju06g0153 566 SUPERFAMILY TPR-like 381 540 IPR011990 GO:0005515
Alju06g0153 566 FunFam Peptidylprolyl isomerase 23 141 - -
Alju06g0153 566 SMART tpr_5 392 425 IPR019734 GO:0005515
Alju06g0153 566 SMART tpr_5 441 474 IPR019734 GO:0005515
Alju06g0153 566 SMART tpr_5 475 508 IPR019734 GO:0005515
Alju06g0153 566 Gene3D - 25 141 IPR046357 GO:0003755
Alju06g0153 566 Gene3D - 256 376 IPR046357 GO:0003755
Alju06g0153 566 Coils Coil 508 528 - -
Alju06g0153 566 PANTHER PEPTIDYLPROLYL ISOMERASE 11 138 - -
Alju06g0153 566 Pfam Tetratricopeptide repeat 453 508 - -
Alju06g0153 566 SUPERFAMILY FKBP-like 139 259 - -
Alju06g0153 566 SUPERFAMILY FKBP-like 15 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0153 Alju-ChrAlju06 1188721 1191855 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0153 10 566 Calmodulin-binding Proteins AT5G48570 68.505 0.0 793