Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0144 ATGGTTGTATATGTTGTGGTTCCTCAGTTATATTTTTCTGCTACGAAACTTGAACATGTCATATCATGGTTTGGTTCACTTTACCAGCTGCCTCAATTTGATGGTATGGATGATCCTGAGGAGGAACGAGAGAGAGTCAAGTTCCTGGCTAAAATGGCGAATCTGGTGGGTCCGATTCCCATTATTTACCATCTCCGCTTCAAATGCAGCACAATAGAGAAACCTTGCAACCCCGTCTTCCTTAAATTCTTCCCCAAATTCCCTTCTCTCCTCACTCAAACCCGTCTTCCCCCTGTTTGTATCTCATCAACTGATGCATTTTCACAAAGTGCTTCCATACAGCACAAAACCCTTCTTGTTGAGACTTACCATCAGCATCGCATCCTCAAATCCTTATTGCGAAAGCTTCAGAAGCAAGATTCAAGCCCTCTCTACATACTCCAACAAGATGGAGATTGGCCCAAAGACCAGTTCTGGGCCGTCGTCAGGTTTCTTAAACATGCCTCCAGATCCAAAGAAATCCTTCAGGTATTCGATATGTGGAAGAAAATTGAGGAATCACGGATTAATGAAGTCAACTATAACAAAATAATACGTGTGTTGACTGAAGAAGGACTGGTGGAAGAGGCTGTGGCTGCCCTGCAGGAGATGAAAAATTATGGCCTCAAACCTTCTTCAGGTGCGTACAATCCAATAATTCATGGTTTCTCCATGGAAGGCAAATTTAGTGATGCTTTGTTTTTTCTAAGTGAGATGAAAGCATCCAGCGTATTGCCGGGCACTGAAACCTATGATAGTTTAATTCAAGGCTATGGGAAGTTAAAGATGTATGATGAGATGGGCTTGTGTGTGAAAAGGATGGAGTTGGATGGATGTTCTCTTGGTCACACGACTTGTAACATACTTATAAGAGAATATTCAAAAGGTGGACTACTTCGGAGAATGGAATCTGTATGTCAAAGAATGCTTTCCAAAAAAATTAATTTGCATTCTTCTACTTTGGTTGCAATGCTTGAGGCTTATGCCAGATTTGGGATAGTTACAAAGATGGAAAAAATTTACCGTAAACTTTTCAACTCAGAAACCCCTTTAAAGGATGATTTAATAAGAAAACTTGCAGAAGTTTATATTGAGAACTATATGTATTCTAGATTAGAAGATTTGGGGATTGATTTACATTCGACTTTTGGTGGGACTGAACTCGTTTGGTGTCTGCGCCTCCTTTCTTATGCTTGTCTTTTGAGTCAAAAGGGCATGGATATCATTGTTGGAGAAATGCAAGAAGTCAAAGTTCAATGGAATATTACACTTGCTAATATTATCATGCTGGCTTATGTGAAGATGAATGATTTCAAGCACTTGAGAATTTTTCTTTCTCAATTGTCAACCTATCGAGTGAAGCCTGACATAGTCACTATTGGAATTATTTTTGATGCAACTAGAAAGGGTTTTGATGGCAGTGGAACTTTGGAGAAGTGGAGAAGGATGGGCTATCTTCATAGAGCTGTAGAAATGGAAACAGATTCTCTGGTCCTTGCTGCGTTTGGGAAAGGTCTTTTTCTTAAAACTTGTGAAGAGGTGTACTCTTCTCTGCACCCAGAGGATAGAGAAAGAGAAACTTGGACTTATGATGGCCTAGTTGATTTAGTATCTGAACATATTGAAGGTAGTATCAGCCGTAGGACAAACAAATAA 1695 0.3982 MVVYVVVPQLYFSATKLEHVISWFGSLYQLPQFDGMDDPEEERERVKFLAKMANLVGPIPIIYHLRFKCSTIEKPCNPVFLKFFPKFPSLLTQTRLPPVCISSTDAFSQSASIQHKTLLVETYHQHRILKSLLRKLQKQDSSPLYILQQDGDWPKDQFWAVVRFLKHASRSKEILQVFDMWKKIEESRINEVNYNKIIRVLTEEGLVEEAVAALQEMKNYGLKPSSGAYNPIIHGFSMEGKFSDALFFLSEMKASSVLPGTETYDSLIQGYGKLKMYDEMGLCVKRMELDGCSLGHTTCNILIREYSKGGLLRRMESVCQRMLSKKINLHSSTLVAMLEAYARFGIVTKMEKIYRKLFNSETPLKDDLIRKLAEVYIENYMYSRLEDLGIDLHSTFGGTELVWCLRLLSYACLLSQKGMDIIVGEMQEVKVQWNITLANIIMLAYVKMNDFKHLRIFLSQLSTYRVKPDIVTIGIIFDATRKGFDGSGTLEKWRRMGYLHRAVEMETDSLVLAAFGKGLFLKTCEEVYSSLHPEDRERETWTYDGLVDLVSEHIEGSISRRTNK 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0144 564 Pfam PPR repeat family 224 272 IPR002885 -
Alju06g0144 564 Gene3D Tetratricopeptide repeat domain 287 387 IPR011990 GO:0005515
Alju06g0144 564 Gene3D Tetratricopeptide repeat domain 147 286 IPR011990 GO:0005515
Alju06g0144 564 NCBIfam pentatricopeptide repeat 298 327 IPR002885 -
Alju06g0144 564 NCBIfam pentatricopeptide repeat 194 225 IPR002885 -
Alju06g0144 564 NCBIfam pentatricopeptide repeat 229 259 IPR002885 -
Alju06g0144 564 NCBIfam pentatricopeptide repeat 263 293 IPR002885 -
Alju06g0144 564 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 190 224 IPR002885 -
Alju06g0144 564 Pfam PPR repeat 298 326 IPR002885 -
Alju06g0144 564 Pfam PPR repeat 193 222 IPR002885 -
Alju06g0144 564 PANTHER OS08G0520200 PROTEIN 100 553 - -
Alju06g0144 564 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 225 259 IPR002885 -
Alju06g0144 564 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 260 294 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0144 153 496 Glycosyltransferase AT1G05670 18.663 4.09e-06 47.8