Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0111 ATGGCACTGTGCAACAAACTTGGGAATCTATTAAGGCAGGGTGTCGCAAAAAACAGACAAGTGCCAGTTGCGTCAATGCTGAATTATGCTCGCTGCATGTCATCCTCCAAGCTTTTCATTGGCGGCCTTTCTTATGCAGTCGATGATCAATCTCTCAGGGATGCGTTTGCCAGCTTTGGAGATGTGGTCGAGGCAAGGGTTATAACTGATAGAGACTCTGGACGGTCAAGAGGGTTTGGATTTGTCAATTACTCCAGTGATGAATCTGCCAGTTCAGCTATTTCTGCAATGGATGGGCAGGAGCTAAATGGGAGAAGCATTCGGGTGAGCTATGCAACTGACAGAACATCTAGACCTCGATCCTTTGGCGACGGCGGATATGGTGGTGGTGGTTTTGGTGGGAATGGTGGTGGTTACCGTAGGGATGATGGAGGCTTTGACAATTCATCCTTTTAG 456 0.4803 MALCNKLGNLLRQGVAKNRQVPVASMLNYARCMSSSKLFIGGLSYAVDDQSLRDAFASFGDVVEARVITDRDSGRSRGFGFVNYSSDESASSAISAMDGQELNGRSIRVSYATDRTSRPRSFGDGGYGGGGFGGNGGGYRRDDGGFDNSSF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0111 151 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Alju06g0111 151 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 108 IPR000504 GO:0003723
Alju06g0111 151 SMART rrm1_1 37 110 IPR000504 GO:0003723
Alju06g0111 151 MobiDBLite consensus disorder prediction 114 151 - -
Alju06g0111 151 SUPERFAMILY RNA-binding domain, RBD 31 144 IPR035979 GO:0003676
Alju06g0111 151 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 29 139 - -
Alju06g0111 151 CDD RRM2_NsCP33_like 37 112 - -
Alju06g0111 151 Gene3D - 27 150 IPR012677 -
Alju06g0111 151 FunFam Glycine-rich RNA-binding protein 2 25 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0111 Alju-ChrAlju06 893598 894808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0111 38 118 Eukaryotic Initiation Factors Gene Family AT4G34110 39.506 2.46e-14 67.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0111 06 893598 894808 Alju06g0111 06 893598 894808 ECH