Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0105 ATGCGTTGCCATGTCGTGACTGTTCCCGGAAGCGATTGTCGCTTCTTCTTCCCAACGCCCTTATCTGTCCCCACCACCACCTTTAATCACAAGTCTCTCGGTTTCCCATCTCGAATCGGCGGTTTCGGCTCTCTCAGAGCTAAAGCCGCCGTCAACGACGGCTATGTGGCGGAGGCCTCCAAGTTGAGCTTCTACGAGCTTCTAGGTATACCCGAATCTGGGTCCTTGTTCGAGATCAAGCAGGCTTACAAGCAGCTTGCGCGCAAGTACCACCCTGATGTGTCGCCGCCAGATCGGGTGGAGGAGTATACCAAGAGGTTCATTCAGGTGCAGGAAGCCTATGAGACCTTGTCTGATCCAAGAAGGAGGGCTATGTATGATAGCGACATGGCCAGAGGGATTCATTTTGCCTTCTCTGCTCGCCGGTGTTACTACGGCGATGAGGTAATTGAACAAAAAAGTGAGTGGAAAGCTCGTTGGCAGAGTCAGCTATCAGAGCTGAAGAGAAGAAGCCAGGCGAAGGAGAATGGAGACAATCTGTCGTGGGCAGCTCGAATGCGTCGTCGAAGAGCAGAATCGAGTAACGAGTCCTAA 594 0.5269 MRCHVVTVPGSDCRFFFPTPLSVPTTTFNHKSLGFPSRIGGFGSLRAKAAVNDGYVAEASKLSFYELLGIPESGSLFEIKQAYKQLARKYHPDVSPPDRVEEYTKRFIQVQEAYETLSDPRRRAMYDSDMARGIHFAFSARRCYYGDEVIEQKSEWKARWQSQLSELKRRSQAKENGDNLSWAARMRRRRAESSNES 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0105 197 CDD DnaJ 64 119 IPR001623 -
Alju06g0105 197 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Alju06g0105 197 SMART dnaj_3 62 122 IPR001623 -
Alju06g0105 197 SUPERFAMILY Chaperone J-domain 60 137 IPR036869 -
Alju06g0105 197 PRINTS DnaJ domain signature 83 98 IPR001623 -
Alju06g0105 197 PRINTS DnaJ domain signature 65 83 IPR001623 -
Alju06g0105 197 PRINTS DnaJ domain signature 102 122 IPR001623 -
Alju06g0105 197 MobiDBLite consensus disorder prediction 167 197 - -
Alju06g0105 197 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 58 194 - -
Alju06g0105 197 FunFam Chaperone protein dnaJ 20, chloroplastic 49 158 - -
Alju06g0105 197 Gene3D DnaJ domain 51 144 IPR036869 -
Alju06g0105 197 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Alju06g0105 197 Pfam DnaJ domain 64 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0105 Alju-ChrAlju06 812173 813602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0105 59 128 C2H2 Transcription Factor Family AT1G74250 42.466 2.96e-08 51.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0105 06 812173 813602 Alju06g0105 06 812173 813602 ECH