Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0096 ATGGAGAGAGAAAGAGCATTGAAACGGCAAGAAAGAAGGTATTTCCCAAATTGCGTGAAGGCAGAAAAGGAAGGCAAAGGTTGTATTCTCGATTCAAATACATCCACACATGGAAACTTTGAACTTGCCATTATTATTAATCTCTCCCCTCTCCTTCCCTTTCTGCTCTCCTCGTCTTCCTATAAGACTCTTCTTCTAGCTCTTGCCGCCGCTCCTTCTTCCTCGCGACCCGGCTGCTCCTTTACTCCGCTCAGGTACCGATCTTTCTTCCTGGATTTGCATTACCGAGAGCTTAGTTTTAATATGAGCTGCTCAGGGCCTAGGGAAAGCCAAGAGGCTGCTAGAGATTTTCAAAATCAGCAAGTCGTGGTTTTTGGCTGGGACCTCAACCTTCCTCTTCTTGAGGAGAGCCTGGATGCAGCAGCTCAAGGATCAGCCCTTGATAATGAAAATTTGCAGTTGCAGATGGGTGATGCTGAATCTGATGTTGTTATAATTTCCCCAAGAAAATTTGAAGAAGCAAAGAACAATTCTCGAAGGAAAAAAGCTTGTCAAAGCTATGCCGTTCTACAAGTGTTTGATGAAGATAGAGGAAACATTCCAGAAGTGACAGCAGATGCCGTTTCTCACCCTATTATTGACAAAAGACATGAAAATCCCCAAAACCAAGCAATTGTGGACTGCGAGCTGCACCTAGGTGTGAAAGACAGTAGGGTAACTAAGGCGCTGTATCCAAGTGGCGTGCTGCCCGAGGAACCCACCTTCAGTTGCACAATTTGCATGGGCCAGCTGATTGAAGAAACATCAACTAAGTGCGGCCACATTTTCTGCAAGCAGTGCATTCAGGCAGCCATAGCTGCTCAACACAAATGTCCCACCTGCAGGCGTAAACTTAGAAAGTCTGACATGTTTAGGGTCTACCTTCCAACAGCTAACTAG 939 0.4569 MERERALKRQERRYFPNCVKAEKEGKGCILDSNTSTHGNFELAIIINLSPLLPFLLSSSSYKTLLLALAAAPSSSRPGCSFTPLRYRSFFLDLHYRELSFNMSCSGPRESQEAARDFQNQQVVVFGWDLNLPLLEESLDAAAQGSALDNENLQLQMGDAESDVVIISPRKFEEAKNNSRRKKACQSYAVLQVFDEDRGNIPEVTADAVSHPIIDKRHENPQNQAIVDCELHLGVKDSRVTKALYPSGVLPEEPTFSCTICMGQLIEETSTKCGHIFCKQCIQAAIAAQHKCPTCRRKLRKSDMFRVYLPTAN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0096 312 Pfam Zinc finger, C3HC4 type (RING finger) 257 294 - -
Alju06g0096 312 SMART ring_2 257 294 IPR001841 -
Alju06g0096 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 311 IPR013083 -
Alju06g0096 312 ProSitePatterns Zinc finger RING-type signature. 272 281 IPR017907 -
Alju06g0096 312 PANTHER ELFLESS, ISOFORM B 123 311 - -
Alju06g0096 312 ProSiteProfiles Zinc finger RING-type profile. 257 295 IPR001841 -
Alju06g0096 312 SUPERFAMILY RING/U-box 256 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0096 Alju-ChrAlju06 742760 745676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0096 128 310 C3H Transcription Factor Family AT5G48655 36.598 1.91e-24 96.7