Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0071 ATGGGGGTCAAAGCTAAGAAAGCAATGAAGAAGAGTCTGAAAAAGGCCACAGCTAATGCATCTGTTTTGAGCAAGAAAACAGAGGGTGACTTCTTGCCCTTGGAAGGTGGACCTGCACGCAAACTTCCTGAACATAAATTGCCAGAGAACACTGCTACTGTGTTATATATTGGTCGCATACCACATGGGTTCTATGAGAAGGAGATGGAAGGGTTTTTTGGACAATTTGGTACCATCAAGAGGTTGAGAATTGCAAGAAATAAAAAGACAGGAAAATCTAGACATTTTGGCTTCATACAATTTGAATCTCCTGAGGTGGCAAAAATTGTAGCTGAGACCATGCACAATTATCTGCTACATGAACATGTTTTGCAGGTTCATCTGATACCTTCAGAGGATGTTCATCCAAAATTATGGAGGGGCTTCAATTACCGGTACAAGCCATTAGACACTGTTCAAATTGAAAGAAAGCGGCTTGGCAAGGAAAGAACATTGGAAGAGCAACTAAAGTTGGTTGAAAAGATCTTGAAGCATGACAAAAAACGGCGGAAGAGGATAGAGGCTGCTGGGATTGATTATGAATGCCCTGAGATTGTGGGCACCATCCAGCCGGGTCCTAAGAAAATAAAGTTTGAAGACTGA 642 0.419 MGVKAKKAMKKSLKKATANASVLSKKTEGDFLPLEGGPARKLPEHKLPENTATVLYIGRIPHGFYEKEMEGFFGQFGTIKRLRIARNKKTGKSRHFGFIQFESPEVAKIVAETMHNYLLHEHVLQVHLIPSEDVHPKLWRGFNYRYKPLDTVQIERKRLGKERTLEEQLKLVEKILKHDKKRRKRIEAAGIDYECPEIVGTIQPGPKKIKFED 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0071 213 CDD RRM_NIFK_like 54 127 - -
Alju06g0071 213 SMART rrm1_1 54 127 IPR000504 GO:0003723
Alju06g0071 213 SUPERFAMILY RNA-binding domain, RBD 35 142 IPR035979 GO:0003676
Alju06g0071 213 Gene3D - 4 128 IPR012677 -
Alju06g0071 213 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 53 131 IPR000504 GO:0003723
Alju06g0071 213 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 55 124 IPR000504 GO:0003723
Alju06g0071 213 PANTHER MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN 7 212 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0071 53 126 Eukaryotic Initiation Factors Gene Family AT1G71770 35.135 4.97e-08 50.8