Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0062 ATGATATATACACAGATAATGGCAAAAGGAGTTGATGCTTCCCTTGGGCTTCACTTGGCTGCAGCATCCCAAATTCAATTCCAAAGCCATTCATTTGATAGTTTTCTGGTATCTGTTGGCCAATTTCAAATAGTAAGTCAGATGAGTCTGCCATTTTCTCTAGCAGCAAACGCTTCCATCAATGGAAGCCATATTAATGTGAGCAAATCAATTGGTAGAAGAAGAGTTGGTGTAATAAGAGCACAAGTGACCTTGGCTCCAAAACCAACAAGGGATATCAGTTATCCCCAGTTGTCAAAACAAGGAATTCCTCTTGCTGATCTGCACGTACAAGAAGTTGTGGAGAGACAGACTCAGCCGGCTAAGTTCATCATCATTCCTCGCCACAAGCCGCAGTTTCGTCCTGGTTTTTTAGAGGAAGCATATGAAAGTTGCAGAAAGATCTGTGCAGAATATGCCAAGACCTTCTATCTAGGAACTCTGCTAATGACAGAAGAAAGACAGAAAGCTATATGGGCGATTTATGTTTGGTGCAGGAGGACAGATGAATTGGTTGATGGTCCTAATGCGGCCTATATGAGCTCTGCTGTTCTTGATAGGTGGGAGGAGAGACTGCATGACATTTTCAACGGACGCCCTTATGACATGCTTGATGCTGCTCTGACCGACACAGTTTCTATGTTTCCCTTGGACATTAAGCCTTTCAGGGACATGATAGAAGGCATGAGGATGGATACAAGGAAAACCCGGTACAAGAATTTTGAAGAGCTATATCAATACTGCTACTATGTGGCCGGAACTGTTGGTCTAATGAGTGTTCCAGTCATGGGAATAGCGGCAGAGTCTCTTCTCCCTCCTCAAACTATATATAATGCAGCACTCTATTTGGGTATTGGGAATCAACTGACAAACATTCTCAGAGACGTGGGAGAGGATGCATCAAGGGGTAGGGTTTACCTTCCCCAAGATGAACTAGCCCAGTTTGGCTTGAGTGACAGGGATATTTTCTCAACAACTGTGACTGAAGGATGGAAGGTGTTCATGAAGCATCAGATAAGCAGGGCAAGATTCTACTTCAAATTGGCAGAGGAAGGAGCTTCTCAGCTTGAGAAGGCCAGCCGTTGGCCGGTTTGGTCGTCGTTAATAATATACGGCAAGATCTTGGACGCAATCGAGGACAACGAATATGACAACTTGACGAGAAGGGCATACGTAGGAAGGGCTAAGAAGCTTATGATGTTGCCTCTAGCTTTCACCAGATCTCTCTCCTTCTCTCTCAATCTCAAGGATCAACACACACACTCCCCCTTCAACAACAACCTTCAATAA 1329 0.4432 MIYTQIMAKGVDASLGLHLAAASQIQFQSHSFDSFLVSVGQFQIVSQMSLPFSLAANASINGSHINVSKSIGRRRVGVIRAQVTLAPKPTRDISYPQLSKQGIPLADLHVQEVVERQTQPAKFIIIPRHKPQFRPGFLEEAYESCRKICAEYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNAAYMSSAVLDRWEERLHDIFNGRPYDMLDAALTDTVSMFPLDIKPFRDMIEGMRMDTRKTRYKNFEELYQYCYYVAGTVGLMSVPVMGIAAESLLPPQTIYNAALYLGIGNQLTNILRDVGEDASRGRVYLPQDELAQFGLSDRDIFSTTVTEGWKVFMKHQISRARFYFKLAEEGASQLEKASRWPVWSSLIIYGKILDAIEDNEYDNLTRRAYVGRAKKLMMLPLAFTRSLSFSLNLKDQHTHSPFNNNLQ 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0062 442 FunFam Phytoene synthase chloroplastic 134 416 - -
Alju06g0062 442 ProSitePatterns Squalene and phytoene synthases signature 2. 296 321 IPR019845 GO:0016765
Alju06g0062 442 PANTHER BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE 92 422 - -
Alju06g0062 442 SUPERFAMILY Terpenoid synthases 141 423 IPR008949 -
Alju06g0062 442 Gene3D Farnesyl Diphosphate Synthase 136 416 IPR008949 -
Alju06g0062 442 SFLD Phytoene synthase like 139 421 IPR044843 GO:0004311
Alju06g0062 442 CDD Trans_IPPS_HH 143 410 IPR033904 GO:0004311
Alju06g0062 442 Pfam Squalene/phytoene synthase 152 407 IPR002060 GO:0009058
Alju06g0062 442 SFLD Isoprenoid Synthase Type I 139 421 - -
Alju06g0062 442 ProSitePatterns Squalene and phytoene synthases signature 1. 260 275 IPR019845 GO:0016765
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0062 Alju-ChrAlju06 519710 521808 Dispersed