Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0033 ATGCCGTGTGGAGTTACTTGTCATGACTCACGACATCGTCAACTCGACGATTCCTGGCTTCCTTTTCAGAACTTCGAAGAATTCTGGGCGAGAAGGAGGTTAGGCGTAAGGCGGATAGGAGAAGAAAGGAAAATGGCAACTTTGATCGAGCCACCGAATAAAATTGGGCCGAAGGGGAAGCATTATTACTCCATATGGCAAACAGTGTTTGAGATTGATACAAAGTACGTTCCAATAAAACCCATCGGCCGAGGAGCATATGGTGTAGTGTGCTCTTCCATCAACAGGGAAACCAATGAGAAAGTTGCAATTAAGAAGATCGGTAATATATTTGAGAATCGCATTGATGCATTGAGAACGCTGAGGGAATTGAAGCTGCTTAGACATATCAGGCACGAAAATGTGATTGCTTTGAAGGATGTTATGTTGCCTGCCCAGAGAACATGTTTCAAGGATGTGTACTTGGTTTATGAACTCATGGATACTGATCTTCATCAGATAATTAAATCTTCGCAGCTCCTCTCCAATGATCATTGCAAATATTTTATATTTCAGTTGCTTCGAGGTCTCAAATATCTTCACTCTGCAAATATCCTTCATCGGGACTTGAAGCCTGGAAATCTGCTCATCAATGCCAACTGTGATCTGAAGATATGTGACTTTGGGCTTGCACGAACAAATGGAGGCGATGGGCAGTTCATGACGGAGTATGTTGTGACTCGCTGGTACCGTGCACCAGAGCTGCTCTTATGCTGTGAAAATTATGGAACCTCAATTGATGTGTGGTCTGTGGGGTGCATTTTTGCGGAGATTCTGGGAAGAAAACCAATATTTCCTGGAACTGAATGCCTCAACCAGTTGAAACTCATTGTACGTGTGCTGGGAAGCCAGGACGAGTCTGATCTAGCGTTTATTGATAATCCAAAGGCCAGGAGGTATATCAAGTCACTGCCTTACACAAGAGGCGTGCGCTTGTCTCAGCTATACCCACAAGCAGATCCATTAGCCATAGATTTATTGCAGAAAATGCTGGTGTTCGATCCAACCAAGAGAATTACCATCATGGAAGCGCTGCAACACCCATATATGGCGGGCCTTTATGATCTGAGATCTAATCCTCCTGCCCAGGTTCCGATCAATCTGGACATAGATGAAAACTGGAGGGAACCCACAATTAGGGAAATGATGTGGAACGAGATGCTTCATTATCATCCCCAAGCTTCTGCCATTGCTTAG 1236 0.4426 MPCGVTCHDSRHRQLDDSWLPFQNFEEFWARRRLGVRRIGEERKMATLIEPPNKIGPKGKHYYSIWQTVFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFENRIDALRTLRELKLLRHIRHENVIALKDVMLPAQRTCFKDVYLVYELMDTDLHQIIKSSQLLSNDHCKYFIFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGGDGQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIVRVLGSQDESDLAFIDNPKARRYIKSLPYTRGVRLSQLYPQADPLAIDLLQKMLVFDPTKRITIMEALQHPYMAGLYDLRSNPPAQVPINLDIDENWREPTIREMMWNEMLHYHPQASAIA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0033 411 ProSitePatterns Protein kinases ATP-binding region signature. 82 106 IPR017441 GO:0005524
Alju06g0033 411 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 75 373 - -
Alju06g0033 411 FunFam Mitogen-activated protein kinase 62 170 - -
Alju06g0033 411 SUPERFAMILY Protein kinase-like (PK-like) 68 368 IPR011009 -
Alju06g0033 411 CDD STKc_TEY_MAPK 70 405 - -
Alju06g0033 411 SMART serkin_6 76 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0033 411 Gene3D Phosphorylase Kinase; domain 1 63 397 - -
Alju06g0033 411 ProSitePatterns MAP kinase signature. 111 214 IPR003527 GO:0004707|GO:0005524|GO:0006468
Alju06g0033 411 Gene3D Transferase(Phosphotransferase) domain 1 160 389 - -
Alju06g0033 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Alju06g0033 411 Pfam Protein kinase domain 77 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0033 411 ProSiteProfiles Protein kinase domain profile. 76 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0033 411 FunFam Mitogen-activated protein kinase 160 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0033 Alju-ChrAlju06 330515 332680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0033 45 407 MAP Kinase Gene Family AT2G18170 85.399 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Alju06g0033 Pkinase 2.2e-70 CL0016