Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0027 ATGGAACTGGCAATTCACAAAAATGACAGACTAAAGCCCAATAGACAGACTGCCCCGCCCATATGGAAACTGCCCTCGCAACTTTGCAAGGGGGCTTACAAGTACGTATCGGAGTTATGGCGGAAGAAGCAGTCAGATGTGATGAAATTTTTGCAGAGAGTGAGATGCTGGGAGTATCGTCAGCAGCCGTCGATCGTGCGTGTGACCAGGCCCACCCGACCTGATAAGGCTCGTCGCTTAGGGTACAAGGCTAAGCAGGGCTATGTGATTTACCGCGTTCGTGTGAGGAGAGGCGGTCGCAAGAGGCCTGTTCCCAAGGGTATTGTCTACGGCAAGCCTACCAATCAAGGTGTAACCCAACTCAAATTCCAACGCAGCAAGAGGTCTGTTGCTGAGGAGCGAGCTGGCCGCAAGTTGGGTGGCCTGAGGGTTCTCAATTCTTACTGGGTCAATGAGGATTCAACCTACAAGTACTACGAGATCATCCTTGTGGATGTTGCCCACAACGCCATTCGGAATGACCCAAGAATCAATTGGCTCTGCAACCCCGTCCACAAGCACAGGGAGCTTCGGGGCCTTACTTCTGCCGGCAAAAAATACAGGGGCTTACGTGGCAGGGGACATAATCATCACAAAGCTCGTCCGTCACGCAGGGCCACCTGGAAGAGGAACAATACCCTCTCCCTTCGTCGCTACCGCTGA 702 0.5299 MELAIHKNDRLKPNRQTAPPIWKLPSQLCKGAYKYVSELWRKKQSDVMKFLQRVRCWEYRQQPSIVRVTRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYYEIILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHNHHKARPSRRATWKRNNTLSLRRYR 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0027 233 MobiDBLite consensus disorder prediction 201 219 - -
Alju06g0027 233 MobiDBLite consensus disorder prediction 199 219 - -
Alju06g0027 233 Pfam Ribosomal L15 31 219 IPR000439 GO:0003735|GO:0005840|GO:0006412
Alju06g0027 233 PANTHER RIBOSOMAL PROTEIN L15 31 233 IPR000439 GO:0003735|GO:0005840|GO:0006412
Alju06g0027 233 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 30 224 IPR012678 GO:0003735|GO:0005840|GO:0006412
Alju06g0027 233 SMART Ribosomal_L15e_2 31 222 IPR000439 GO:0003735|GO:0005840|GO:0006412
Alju06g0027 233 Gene3D Ribosomal protein l15e 30 233 IPR024794 GO:0003735|GO:0005840
Alju06g0027 233 ProSitePatterns Ribosomal protein L15e signature. 75 98 IPR020925 GO:0003735|GO:0005840|GO:0006412
Alju06g0027 233 FunFam Ribosomal protein L15 30 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0027 Alju-ChrAlju06 228203 229285 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0027 31 233 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 91.626 1.09e-126 355