Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0021 ATGGGGGCTTACAAGTACGTATCGGAGTTATGGCGGAAGAAGCAGTCAGATGTGATGAAATTTTTGCAGAGAGTGAGATGCTGGGAGTATCGTCAGCAGCCGTCGATCGTGCGTGTGACCAGGCCCACCCGACCTGATAAGGCTCGTCGCTTAGGGTACAAGGCTAAGCAGGGCTATGTGATTTACCGCGTTCGTGTGAGGAGAGGCGGTCGCAAGAGGCCTGTTCCCAAGGGTATTGTCTACGGCAAGCCTACCAATCAAGGTGTAACCCAACTCAAATTCCAACGCAGCAAGAGGTCTGTTGCTGAGGAGCGAGCTGGCCGCAAGTTGGGTGGCCTGAGGGTTCTCAATTCTTACTGGGTCAATGAGGATTCAACCTACAAAAACTTGATATCTAGATCAGAAATGCAAATGGGACAACGCCAACAAGAACTTCAACGTGAACTTCAACGGATGTATGCTGACGGGACAGACATAGAGGCGAATCTTCTGCCGTGGTGCTTTTTGATACAAGGCCAGCTAGTCCTAAAGCAAGAGGTTGATTATGGGTGCAAACGAGACAACGGCAGAGATGGCCGCAAATGTAAGATGCTTCTAAGAAGCAAATTGTATTACAACTAG 621 0.4944 MGAYKYVSELWRKKQSDVMKFLQRVRCWEYRQQPSIVRVTRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKNLISRSEMQMGQRQQELQRELQRMYADGTDIEANLLPWCFLIQGQLVLKQEVDYGCKRDNGRDGRKCKMLLRSKLYYN 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0021 206 SMART Ribosomal_L15e_2 2 164 IPR000439 GO:0003735|GO:0005840|GO:0006412
Alju06g0021 206 FunFam Ribosomal protein L15 1 143 - -
Alju06g0021 206 PANTHER RIBOSOMAL PROTEIN L15 1 128 IPR000439 GO:0003735|GO:0005840|GO:0006412
Alju06g0021 206 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 129 IPR012678 GO:0003735|GO:0005840|GO:0006412
Alju06g0021 206 Pfam Ribosomal L15 2 128 IPR000439 GO:0003735|GO:0005840|GO:0006412
Alju06g0021 206 ProSitePatterns Ribosomal protein L15e signature. 46 69 IPR020925 GO:0003735|GO:0005840|GO:0006412
Alju06g0021 206 Gene3D Ribosomal protein l15e 1 151 IPR024794 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0021 Alju-ChrAlju06 200472 203176 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0021 1 128 Cytoplasmic Ribosomal Protein Gene Family AT4G17390 94.531 6.59e-74 220