Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2254 ATGGGAAGAACTCCCTGCTGCGACAAGAAGGGTTTGAAGAAGGGGCCCTGGACGACTGAAGAGGATGAGCTTCTTGTTAATTTCATCAACAAGAACGGCGGCCATGGCAGCTGGCGTTCTCTCCCTAAGTTGGCAGGTCTGCTTCGCTGTGGGAAGAGTTGCAGGCTAAGGTGGACCAACTATCTGAGGCCTGACATAAAACGTGGCCCATTTTGTGCTGAGGAAGAGAAGCTTGTCATACAGCTTCATGGCATCCTCGGTAATAGGTGGGCGGCGATAGCGTCGCAGCTGGCAGGAAGAACAGACAATGAGATAAAGAATCTGTGGAACACTCACTTGAAGAAGCGACTCCGATGCATGGGACTCGACCCTCTCACCCACAAGCCTATCTCTTGTTCTTCTTCCCCTTGTGATCCCCACGTGTCGACGCCGGCGCGCCACATGGCTCAGTGGGAGAGTGCGAGGCTGGAGGCGGAGGCTCGCCTCTCCAAAGACGCCTCTCTCTCTCACTACTCCTCCTCCGACTTGTTCCTCCGCCTCTGGAACTCCCACGTGGGCGACTCCTTCCGCAACATGCACACCGTCTCCTCTCCCGGCTCCTCCTCTTCCACCAAGTGCCCCACCGTCTCTAACAAGCTCATGGCTGCCTCTGATGACTCTTCCATCTCTACTGACCCGGAAGACTCCTCTGACACCGCCTTGCAGCTCTTGTTGGATTTCCCCATTTACAATGACATGAACTTCCTAGAACCTAACTCTTTCATTTCTCCCCTTTAG 777 0.5457 MGRTPCCDKKGLKKGPWTTEEDELLVNFINKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFCAEEEKLVIQLHGILGNRWAAIASQLAGRTDNEIKNLWNTHLKKRLRCMGLDPLTHKPISCSSSPCDPHVSTPARHMAQWESARLEAEARLSKDASLSHYSSSDLFLRLWNSHVGDSFRNMHTVSSPGSSSSTKCPTVSNKLMAASDDSSISTDPEDSSDTALQLLLDFPIYNDMNFLEPNSFISPL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2254 258 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Alju05g2254 258 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Alju05g2254 258 SMART sant 67 115 IPR001005 -
Alju05g2254 258 SMART sant 13 64 IPR001005 -
Alju05g2254 258 Coils Coil 258 258 - -
Alju05g2254 258 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Alju05g2254 258 Gene3D - 70 117 - -
Alju05g2254 258 CDD SANT 16 62 IPR001005 -
Alju05g2254 258 Gene3D - 11 68 - -
Alju05g2254 258 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Alju05g2254 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Alju05g2254 258 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Alju05g2254 258 FunFam MYB transcription factor 69 130 - -
Alju05g2254 258 FunFam Myb transcription factor 11 68 - -
Alju05g2254 258 CDD SANT 73 113 IPR001005 -
Alju05g2254 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Alju05g2254 258 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2254 Alju-ChrAlju05 55863679 55864995 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2254 1 252 MYB Transcription Factor Family AT3G61250 61.922 2.32e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju05g2254 Myb_DNA-binding 2e-13 CL0123