Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2210 ATGGCAAGGTGGTCGATACCTGAGGACGGACTTATTCTAAATTTCACTGAAATCCCTGAAAAGTTTAAAAATGCTAGAATCTATATTGATCTCGAGGTATATTCAAGAACTCATGGGGCCAGAGACCAAGATTATAGAGTCGTTGAAGTTGAATCTAATGAGTTCCAATGTTCATTTGATGAATTTCTTATTGATTTTCTGAAAGAGGTTTATGGAAACAATTGTTTTCTACCTATTCCACCAATGCTTGGCAATGAGCAACCAGTGGATTTGAAAACCTTATTCTTGATAGTGATAGCGACAGGAGGGTATGATGCAGTCTCTAAAAACAAGTTATGGAATTTGGTGGCCGAAAAATCTGGCTTAGGCATTAACATTGGTTCATCAGCAAAGTTGATCTATTTCAAGTATTTATGTACCTTAGAAACATGGCTTTTGAAAGTTTCTGAGGGCATAGTACTTAGTCATAGTCTAATTGATGATAGAATCAACTTTTGTAGTCATATGATAGAACTTCAAGCTAAAATAAAAAGGCTTTTGTCAGATTATATGGCTCAAGATTTGGGAAATATAATATCTCGAATTTATGATTTCAAGAATGAATATGAATTTCTGGATGGGAGTAAATTGTTTGATGAGTACTCAATGATAGTGAAAGGGTGTATTGGTGGAAGGAAGATCATTGTGAAGAAACTAGTAAGTGCATTAGATAATGAAGGGGAATCATCTAATAACAATGAAATGAATAATATGGCTAGTTCATCTAATGGAGTCAATGAATTTGACAATGACAATGATGATGATGTCTTGATATTAGACCCATCTAGTGTTAATAAGAAGAACTTTGGGAGTAAGAGGAAAAGGAAGTCTGTGCAAGAAATCTTTTGTTGGGTAACTAGCATTGCAAAGAATCCATATGATCCTTTACCATGTTCATCAATACTTGAAAGATCAAAGTGGAGTTCTCAAAGTACTGAGGAGATGAAGAAGCAAGTTTTGTTGTTTCGAGAGGTTGTCTATATGAAAAGAAATGGTGAATCAAGAAAACAACATGATGATGGGCAGGGTATGAAGATGCATCCAGGCATGTATGATGGTGATCACCCTGGGAAAACTTGCATTCTTAAGGAAGGGATGAAGTGTGATGAGTGTAACAGGACGCTTCCAATTCCAAATGAAAATCTCTTATCTGTGTTACCACTAGACTCATCAAATATTCCCATACCAACTGAAGCTTATTCAAATATTAATACTACTAGTCAAAGTCCATACACTGAAGTTGGTAGAGAGAAAATTGAACATTTAGCCAAATGCACCACATTAGCCATCCCTAAAGGGCCTGCTCATCAAGCTTCAGTACCAGAATGGACTAGTGTAACTTTAAAAAGTGATCTTAAATGGTTAGGGACCCAAATATGGCCATTGAAAAGTGCAAGTCAAAGACTTCTCATTGAAGTAAGGGATCTTATTGGAAAGGGAAGAGATGACCTTTGCAGCTGCCAAATACCAGGATCAGTGGATTGTGTTAAATCTCACATTATTGAAAGTAGAGCTAAAGTTAAATTGGAATTGGACGAGGCTTTTTATCATTTGCATTTCGACAAGGTAGGGGAAGATGTTAGCCATTATTGGACTTATGAAGAGGAGAAGAAGTTTAAGGATGTGTTGAAATCAAATGTCTCTTCACAAAAGAAATGTCTTTGGAATCGTATTTTCAATTCATTTCCTAAGAGAAGCCGACAAGATGTGGTCAACTACTATTTCAATGTCTTTGTTTTGAGATGTCGAAGATTCCAGAATCAACATTCTCCAGATAACATTAATAGTGATGATGATCAATTGGAGTCGAAGCCACTGATCAAACCCAAAGCAACTAGCTCATCAAAGAAAAATTTTCCTTTTCTCGCATTGCTGACCCAACTAACTTTGCTTCTTCTAGTTGCAGCACAATCCTCCTCCCACATCTCTCTCTATCAGAGTTCCTGA 1986 0.364 MARWSIPEDGLILNFTEIPEKFKNARIYIDLEVYSRTHGARDQDYRVVEVESNEFQCSFDEFLIDFLKEVYGNNCFLPIPPMLGNEQPVDLKTLFLIVIATGGYDAVSKNKLWNLVAEKSGLGINIGSSAKLIYFKYLCTLETWLLKVSEGIVLSHSLIDDRINFCSHMIELQAKIKRLLSDYMAQDLGNIISRIYDFKNEYEFLDGSKLFDEYSMIVKGCIGGRKIIVKKLVSALDNEGESSNNNEMNNMASSSNGVNEFDNDNDDDVLILDPSSVNKKNFGSKRKRKSVQEIFCWVTSIAKNPYDPLPCSSILERSKWSSQSTEEMKKQVLLFREVVYMKRNGESRKQHDDGQGMKMHPGMYDGDHPGKTCILKEGMKCDECNRTLPIPNENLLSVLPLDSSNIPIPTEAYSNINTTSQSPYTEVGREKIEHLAKCTTLAIPKGPAHQASVPEWTSVTLKSDLKWLGTQIWPLKSASQRLLIEVRDLIGKGRDDLCSCQIPGSVDCVKSHIIESRAKVKLELDEAFYHLHFDKVGEDVSHYWTYEEEKKFKDVLKSNVSSQKKCLWNRIFNSFPKRSRQDVVNYYFNVFVLRCRRFQNQHSPDNINSDDDQLESKPLIKPKATSSSKKNFPFLALLTQLTLLLLVAAQSSSHISLYQSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2210 661 CDD ARID 59 138 - -
Alju05g2210 661 SMART bright_3 54 147 IPR001606 GO:0003677
Alju05g2210 661 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 52 618 - -
Alju05g2210 661 CDD SANT 544 591 IPR001005 -
Alju05g2210 661 Gene3D - 38 152 IPR036431 GO:0003677
Alju05g2210 661 ProSiteProfiles ARID domain profile. 53 146 IPR001606 GO:0003677
Alju05g2210 661 SUPERFAMILY ARID-like 54 154 IPR036431 GO:0003677
Alju05g2210 661 SMART ARID_2 50 142 - -
Alju05g2210 661 Pfam ARID/BRIGHT DNA binding domain 67 141 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2210 Alju-ChrAlju05 55520057 55529479 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Alju05g2210 ARID 3.1e-08 CL0123