Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2200 ATGTCAGTCTACGATGCAGCTTTCGTGGACACAGAGCTCTCCAAGAAGACCTCAATCTTTGGTCTCCGACTATGGGTTGTGATCGGAATCCTCGTCGGTTCTATTATTGTGCTCACTCTCTTCGTGCTCTCGCTCTGCCTCACCTCTCGCCGCCAAAGACGTCAAGAAAACCCTCAATCCAACAAAACCCCTGTCGTTTCGAAGGAAATCCAAGAGATCGTGCACCTGACCGCACCCAATCAGCACCCGGGCCCTGAGATCCAGGTGGATTTCGGGAAAGCGGAGCACCGGGTCGTGGTTTTCACCGATCGGGTCTCGAGTGGAGAGAGCAAGGGAGGCGCCACTAGTGCGTGTGAAACGACGTCGTCGTTTGGGAGTGGGAGTATTGGGCCTGAGGTTTCGCATCTTGGTTGGGGAAGATGGTACACCTTGAGGGAGCTGGAGGCTGCAACTAACCATCTGTGTGAAGAGAATGTTATTGGGGAAGGTGGGTACGGGATCGTTTACCATGGAGTTCTTGGTGATGGTACCAGAGTTGCAGTGAAGAACCTTTTGAATAACAAGGGTCAAGCTGAGAAAGAATTTAAAGTAGAAGTAGAAGCAATTGGTCGTGTGCGCCACAAGAATCTTGTTAGGTTGCTTGGTTACTGTGTTGAGGGGGCATACAGGATGCTTGTGTATGAATATGTTGATAATGGCAATTTGGAACAGTGGATTCACGGGGATGTTGGAGCTGTCAGCCCTTTGACATGGGATATCCGCATGAACATTATACTGGGAACTGCAAAGGGATTGGCCTATCTTCATGAGGGTCTTGAACCAAAGGTTGTCCACCGAGATGTGAAATCTAGCAACATACTCCTTAATCGGCAATGGAACCCCAAAGTTTCAGATTTTGGACTTGCTAAACTCTTGAATTCTGAGCGGAGCTATGTCACCACCCGAGTAATGGGGACATTTGGTTATGTTGCTCCAGAATATGCCTGCACTGGTATGTTGACTGAGAAGAGCGATGTTTATAGCTTTGGAATACTTATCATGGAGATAATTACCGGGAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTAAATCTAGTAGAGTGGTTGAAAACAATGGTTGGGAATCGAAAAGCTGAGGAAGTTGTTGATCCCAAGCTCAAGCTCCCTGAGATGCCATCTCCAAAGGCTCTAAAGCGTGCTCTGTTGGTTGCTCTTCGATGTGTTGATCCTGATGCAACAAAAAGGCCTAAGATGGGACATGTGATCCACATGCTTGAGGCAGACGACCTTTTGTTCCGTGATGAACGCCGGATTGGAGGAGAATCTTCCAGCTCTCGTCGCGATTTTATACAAGAGCATAAGGATTCAAATGCTGATAAAAAGCCTGTAGGCAGAGGTACCACTGACCAATCTCAAGATGATCATAGTAGGAATCAGCATCAACCCACTAGGTGGAGATAA 1467 0.4772 MSVYDAAFVDTELSKKTSIFGLRLWVVIGILVGSIIVLTLFVLSLCLTSRRQRRQENPQSNKTPVVSKEIQEIVHLTAPNQHPGPEIQVDFGKAEHRVVVFTDRVSSGESKGGATSACETTSSFGSGSIGPEVSHLGWGRWYTLRELEAATNHLCEENVIGEGGYGIVYHGVLGDGTRVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWIHGDVGAVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLNRQWNPKVSDFGLAKLLNSERSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLVEWLKTMVGNRKAEEVVDPKLKLPEMPSPKALKRALLVALRCVDPDATKRPKMGHVIHMLEADDLLFRDERRIGGESSSSRRDFIQEHKDSNADKKPVGRGTTDQSQDDHSRNQHQPTRWR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2200 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Alju05g2200 488 MobiDBLite consensus disorder prediction 443 488 - -
Alju05g2200 488 FunFam Putative receptor-like serine/threonine-protein kinase 230 441 - -
Alju05g2200 488 Gene3D Phosphorylase Kinase; domain 1 136 229 - -
Alju05g2200 488 Pfam Protein kinase domain 157 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g2200 488 PANTHER OS01G0323000 PROTEIN 8 455 - -
Alju05g2200 488 SMART serkin_6 154 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g2200 488 SUPERFAMILY Protein kinase-like (PK-like) 132 428 IPR011009 -
Alju05g2200 488 CDD STKc_IRAK 160 428 - -
Alju05g2200 488 Gene3D Transferase(Phosphotransferase) domain 1 230 439 - -
Alju05g2200 488 FunFam Probable serine/threonine-protein kinase At1g01540 134 229 - -
Alju05g2200 488 ProSiteProfiles Protein kinase domain profile. 154 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g2200 488 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2200 Alju-ChrAlju05 55447831 55450204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2200 126 428 Receptor kinase-like Gene Family AT4G02010 47.249 2.46e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Alju05g2200 Pkinase 6.8e-47 CL0016