Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2198 ATGTATTTTCCAAAAGCCGAAATTCTCTGTTCACCACCTCTGATGCTGAATAATGGACTACTTGAAGAGTTGTCCTTGTGGCTTTCTTGTGTAAAGCTTAAGATGATGGTTGTCCTTGAAGCATTTGTTTTTTTTTTGTACGTAGGATCATACATATCGGTCTTGAATCTTGATCGGGTCACTTTCGGAGGCTTTATTGTACAGTCTGCTGAGCGCTTGTGTGTATTTTCTTGTGAAGCTGCTTTAATGGTGGTTGGGTTAAGGCTTAGGAGGGCTGATTGTCCAAAAGTCAAGGGCATTTTCAGATATCCCTACCCCTCTAAACGAAATCCCTTCCCCTTGGCGCTGGAAAATCTAATCCATTGTTGCTCCGAGAGTGAGGAACGAGCAAACACCATTTCTATGGCTAATCCTTCGATTCTCCAGTCCTCAACATCGTCGTTTCTGGGTCAATTTCGAGTCTTTCCATCTCCATTGTCCTCCGGACTCCTCTACCGAAATGGGAATGGAGGTGCGGTGGCGCCGGTGAAGGCCACTGCGGCTGCGTCCGGAGCTTTATTGGTGGAGAAGTCTGAGGCAGAGAAGCCCCACCGGCTCAAAATAAATTACACTGAGAAAATTGTTCCCTTGCTCATGGAAGAATTCAACTACACCAGTATACACGAGGTCCCTAAAATTGAGAAGGTCGTGGTTAACTGCGGTATCGGAGATGCTGCACAGAATGCAAAGGGTTTGGAGGCTGCAATGAATGACCTAGCACTCATCACAGGGCAGAGGCCTGTTAAGACACGAGCGAGGGCTTCAGTTGCCACCTTCAAGATCAGGGAAGGCCAACCCCTTGGAATTGCTGTGACACTCAGAGGAAAAATGATGTTCTCATTCCTAGACCGACTCATCAACTTGGGACTTCCTAGGACAAGGGATTTCCAAGGTGTTAACCCCAACAGCTTTGATGGACACGGGAATTACAGCATCGGCATCCAGGACCAGAGTGTGTTCCCAGAAATCAAGGCTGATCTCGTCGGTAATCCCAGAGGAATGGATGTGTGTATAACGACAACGGCTAAAACAGATCAAGAAGCAAGCAGATTACTGGTTCTTATGGGCATGCCATTCAGATCAGGAGGTGGTCCTGCTACAACAATCCGCAAAAAGAAGCTCAAGTCTCACCATTTTGACTCCAAGTCAAAGGGCAGAGGAAGGAGTTGA 1209 0.4706 MYFPKAEILCSPPLMLNNGLLEELSLWLSCVKLKMMVVLEAFVFFLYVGSYISVLNLDRVTFGGFIVQSAERLCVFSCEAALMVVGLRLRRADCPKVKGIFRYPYPSKRNPFPLALENLIHCCSESEERANTISMANPSILQSSTSSFLGQFRVFPSPLSSGLLYRNGNGGAVAPVKATAAASGALLVEKSEAEKPHRLKINYTEKIVPLLMEEFNYTSIHEVPKIEKVVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARASVATFKIREGQPLGIAVTLRGKMMFSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGIQDQSVFPEIKADLVGNPRGMDVCITTTAKTDQEASRLLVLMGMPFRSGGGPATTIRKKKLKSHHFDSKSKGRGRS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2198 402 Hamap 50S ribosomal protein L5 [rplE]. 196 374 IPR020930 GO:0003735|GO:0005840|GO:0006412
Alju05g2198 402 Pfam ribosomal L5P family C-terminus 279 372 IPR031309 -
Alju05g2198 402 SUPERFAMILY RL5-like 198 373 IPR022803 -
Alju05g2198 402 ProSitePatterns Ribosomal protein L5 signature. 252 268 IPR020929 GO:0003735|GO:0005840|GO:0006412
Alju05g2198 402 MobiDBLite consensus disorder prediction 383 402 - -
Alju05g2198 402 Pfam Ribosomal protein L5 220 275 IPR031310 -
Alju05g2198 402 FunFam 50S ribosomal protein L5 194 374 - -
Alju05g2198 402 Gene3D - 190 374 IPR022803 -
Alju05g2198 402 MobiDBLite consensus disorder prediction 376 402 - -
Alju05g2198 402 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 201 375 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2198 225 351 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 29.134 6.29e-07 47.8