Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2197 ATGGTGTCGGTAAATCCGAACCCGGCTCAAGGCTTCTACTTCTTCGATCCCACCAAGATGGGGCTTCCCGGTGTTAATCATACGCCGCCACTTCCGGCTGCTGCTACGGCTTCTGCGTCCGCGAGCCCCGCCGCCGGCGTCAGTACTACTTCGTACGGGGAGGATCTGAGTAAGAAGATCCGAAAACCATACACGATAACCAAGTCCAGGGAGAGCTGGACGGAGCAGGAGCACGACAAGTTTCTCGAAGCCCTGCAGTTATTTGACCGTGACTGGAAGAAGATTGAAGCATTTGTTGGTTCAAAAACTGTTATCCAGATACGAAGTCATGCACAGAAGTATTTCCTGAAAGTTCAGAAGAATGGAACAAGTGAACATGTGCCTCCCCCGAGGCCAAAAAGGAAGGCTGCTCATCCGTACCCACAAAAGGCACCTAAAAATGCTCCAGCAGTATCCCAAGTTGCAATGCCATTGCAATCTTCATCTTTCATTGAGCCCCCATACATTTATAGGCCAGACTCATCATCTGCGCTGGGAACTCCAGTTACCAGTGTGCCCTTGTCAAATTGGAATCGTAATAATATCCCACCACCCAGTGTGCCACAAATAACTAGAGATGAAATGGGATTGCCCGGGCAAGCTGCTTCTCTAAATTGTGGGTATAGCAGTAGTAATGAGAGCACTCCAAGGGCTTGGCCAGGTAGCAAAGTTATTGATCAAGGGAACTCAGGCAAGCCGATCAAAGTGATGCCAGATTTTGCACAAGTCTATAGTTTTATTGGTAGTGTGTTTGATCCGAATGAAACAAATCACTTGGAGAGACTGAAACAGATGGACCCAATAAATGTGGAAGCAGTATTGTTATTGATGAGAAACCTCTCCATCAATTTAATGAGTCCCAAATTTGAAGATCATAGAAGGTTACTTTCATCCTACGAGCCTGGCTCTTAG 951 0.4711 MVSVNPNPAQGFYFFDPTKMGLPGVNHTPPLPAAATASASASPAAGVSTTSYGEDLSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAPAVSQVAMPLQSSSFIEPPYIYRPDSSSALGTPVTSVPLSNWNRNNIPPPSVPQITRDEMGLPGQAASLNCGYSSSNESTPRAWPGSKVIDQGNSGKPIKVMPDFAQVYSFIGSVFDPNETNHLERLKQMDPINVEAVLLLMRNLSINLMSPKFEDHRRLLSSYEPGS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2197 316 MobiDBLite consensus disorder prediction 119 148 - -
Alju05g2197 316 PANTHER SWI/SNF COMPLEX-RELATED 43 298 - -
Alju05g2197 316 SMART sant 69 117 IPR001005 -
Alju05g2197 316 CDD SANT 72 115 IPR001005 -
Alju05g2197 316 ProSiteProfiles SANT domain profile. 68 121 IPR017884 -
Alju05g2197 316 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Alju05g2197 316 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Alju05g2197 316 MobiDBLite consensus disorder prediction 220 239 - -
Alju05g2197 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Alju05g2197 316 FunFam protein REVEILLE 6 isoform X1 72 120 - -
Alju05g2197 316 SUPERFAMILY Homeodomain-like 64 120 IPR009057 -
Alju05g2197 316 NCBIfam myb-like DNA-binding domain, SHAQKYF class 68 117 IPR006447 GO:0003677
Alju05g2197 316 Gene3D - 73 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2197 Alju-ChrAlju05 55424409 55428677 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju05g2197 Myb_DNA-binding 2.6e-11 CL0123