Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2154 ATGGAAGAGACCATGACGTGGGGACAAGTCAGTCTGATCACTGAGCTAATCCAAGGGAAGGAATTTGCAAAGCAACTCTGTTCCCATCTTTCTTCTTCTTCATCTCTTGAAGAGAAAGGGCTCTTAGTAGAAAAAATTCTTTCATCCTATGAGAAAGCTTTGTCCTTGCTTAATGTGGGAGAGACTGACGTCATCAATGGGAAGATGATGATGGACTCTCTCTGTTCGTTTATTGCTGGGAGCCCCAAAAGTGAGGTGCTGGACCAAGATTTTAACCTCAAGGATTCCATCAAGAAAAGAAAGTCGATGCCTAGATGGACAAAGCAAGTTAAGGATTGCTCAGGAACAGGGCTTGAAGGGTCTCAGGATGATGGTTATAACTGGAGAAAGTATGGACAGAAGGATATTCTAGGATCCAAGTTTCCAAGAGGATATTACAGATGTACTCACAGAAATGTGCAAGGTTGTCTGGCTACAAAGCAAGTTCAAAGATCTGATGAAGACCCAACCATCCTTGAGATAACCTACAGAGGAAGACACACATGCACACAAGCATCTCAGGTGAAAAAGACATTACCATTAAAAAGAAAGGTGGGTTTGGTGGAAAATAATCCAATGCAGAAACATCAAGAACATGATCAACCACTATTGGAACTAAACCCAGAAGAGTTTTTAAATGTTGGAGCAGAGGTTGAAGTTAAAACAGAGGAATTTGATACAAAGGAGAAAATTTTCCAACCCTTTTGCTTCCCTTATGCTTCAATAGGATCTGAGAATGACGACAACCTATTATTCTCCGAGCCATTGATAGAAAACCACTTCATGGAAAGTTTGTCTTCTCCTAAGTTTATCTCACCGGCAACCTCGGAGTCTAACATTTTCTGTCTGAATGTGCAGACTTCAGATTCTGATGTCACTGACACAGTTTCAGCTCCAACTTCAGTTACCAATTCCCCAATGGCTGATTTGGATCTCTTAATAGATTTTGACTCCGATTTCCCTCTTAACGAGGCAGAACTGTTTTCCTTATAG 1032 0.4109 MEETMTWGQVSLITELIQGKEFAKQLCSHLSSSSSLEEKGLLVEKILSSYEKALSLLNVGETDVINGKMMMDSLCSFIAGSPKSEVLDQDFNLKDSIKKRKSMPRWTKQVKDCSGTGLEGSQDDGYNWRKYGQKDILGSKFPRGYYRCTHRNVQGCLATKQVQRSDEDPTILEITYRGRHTCTQASQVKKTLPLKRKVGLVENNPMQKHQEHDQPLLELNPEEFLNVGAEVEVKTEEFDTKEKIFQPFCFPYASIGSENDDNLLFSEPLIENHFMESLSSPKFISPATSESNIFCLNVQTSDSDVTDTVSAPTSVTNSPMADLDLLIDFDSDFPLNEAELFSL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2154 343 FunFam WRKY transcription factor 53 108 185 - -
Alju05g2154 343 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 301 IPR044810 GO:0003700
Alju05g2154 343 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju05g2154 343 SUPERFAMILY WRKY DNA-binding domain 122 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju05g2154 343 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju05g2154 343 Gene3D WRKY domain 107 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju05g2154 343 Pfam WRKY DNA -binding domain 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2154 Alju-ChrAlju05 54817094 54819049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2154 16 209 WRKY Transcription Factor Family AT5G24110 47.959 9.23e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju05g2154 WRKY 1.6e-27 CL0274