Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2145 ATGCAAAATCAACCTCAATTATTGTCAAATCTTGAAGGTCTCTCTCTCTCTCTGAAAGATTCTATTCTGAACTCTGCAATGGGATTCGAACCTCAATCATCATCAGCATACTCGAACCTCGACTCCATCCTAGTATCTGACTTGCAAGACAATGAAGAAGAACAAATTTTCTGTTCCTACGCTTCATGGCTAGAAAAGCATCCCTCTGCATTGGACGAGTTTGAGGAAATGATGAGCATTGCTAAGGAAAAAGAGATTGTTGTGTTTTTGGACTATGATGGAACTCTCTCCCCCATTGTTGATGACCCTGATCAAGCTCATATGACTGATGCTATGCGCACAGCAGTAAATGAAGTTGCTTCTTGTTTTCCTACGGCAATTGTCAGTGGAAGGAGTAGAAAAAAGGTGAGTGAATTTGTGAGGTTGAGAAGTGTGTACTATGCTGGAAGTCATGGGATGGATATATCAACCCCAAAAGGCTCTTCCAAATCTCAAGACCAGAAACATCAGACTAAGGCTGTAGATGAAAAGGGTAATCAAGTAGTTCACTTTCATCCCGCACAAGAATTCCTCCCAACTATCAAGGAGATAATTCAGGTTCTGAATGAAAATGTTCTAAGAGTAGAGGGGTCCAAGATAGAGGACAATTTATTCTGCATTTCTGTACACTACAGGCTTGTGAAAAATGAAAAGGAAGTTGGTATTCTCAGAAAGATGGTGGAGTCTATCATGGAAGCTTACCCCAATTTTCACATATCAGGAGGAAAAAAGGTTATAGAAATACGCCCAAATATAAGTTGGGATAAAGGTTGTGCTGTGCAATATTTACTAGGCACTCTTGGGTTTGACAACTTTGAAAAGATCGTACCACTGTACATAGGTGATGATACATCTGATGAAGACGCTTTTAAGGTTATAAGACACAGTGGACAAAGTTTTCCAATCATTGTTTCTTCAAAAGCTAAGGAGACAGAAGCTTGTTATTCTCTGCGTGATCCAGATGATGTTCTGTTTTTCTTAAAACGTCTCGCTAAGTGGAAGAAAAGCTTGGTATAA 1056 0.3958 MQNQPQLLSNLEGLSLSLKDSILNSAMGFEPQSSSAYSNLDSILVSDLQDNEEEQIFCSYASWLEKHPSALDEFEEMMSIAKEKEIVVFLDYDGTLSPIVDDPDQAHMTDAMRTAVNEVASCFPTAIVSGRSRKKVSEFVRLRSVYYAGSHGMDISTPKGSSKSQDQKHQTKAVDEKGNQVVHFHPAQEFLPTIKEIIQVLNENVLRVEGSKIEDNLFCISVHYRLVKNEKEVGILRKMVESIMEAYPNFHISGGKKVIEIRPNISWDKGCAVQYLLGTLGFDNFEKIVPLYIGDDTSDEDAFKVIRHSGQSFPIIVSSKAKETEACYSLRDPDDVLFFLKRLAKWKKSLV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2145 351 FunFam Trehalose 6-phosphate phosphatase 187 264 - -
Alju05g2145 351 SUPERFAMILY HAD-like 87 347 IPR036412 -
Alju05g2145 351 Gene3D - 86 192 IPR023214 -
Alju05g2145 351 Gene3D - 211 350 IPR023214 -
Alju05g2145 351 CDD HAD_TPP 87 336 - -
Alju05g2145 351 Pfam Trehalose-phosphatase 89 333 IPR003337 GO:0003824|GO:0005992
Alju05g2145 351 NCBIfam HAD-IIB family hydrolase 88 310 IPR006379 -
Alju05g2145 351 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 39 348 IPR044651 GO:0004805|GO:0005992
Alju05g2145 351 NCBIfam trehalose-phosphatase 86 345 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2145 Alju-ChrAlju05 54730971 54738840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2145 88 344 Trehalose Biosynthesis Gene Families AT1G60140 25.940 4.57e-07 49.7