Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2143 ATGAGCTGTGGACACCAGAATTCAAATGTCTTGTCACTTCTCAGTTGTTCATGCCCCTTGAAAAATCCTGATGACATTGACGACCCAAGTGTCTTCAATTTTGGAATATATATCGACGCCCTAAGATCTCGTGTGGTAGAATCAACAACCCATGTTCCTCACAAGATCTTCTATTGCCTTTGGTGGGGTCTGCGCAATGTGAGTTCTCTGGGGCAAGACCTCAAGACTAGTACATTTATTGAGGAAATATTCTTCACTATCTTCATTTCCATCTTCGGGTTGATTTTATTCGCGTTACTCATTGGAAACGTACAGAAATACCTACAGTCCATGCAATCTACAGCTGTTAGAGCTGAAGAAATGAGACTGAGGAAACAGAGTATAGAGAAATGGACGTCCCAGCGTATGCTACCAGAGAACTTGAAGGAAAGAATAAGACAAAATGAAAATTACAAATTGGAACAAGATCAGGATGTGGATGAAGAAACATTAATCCACAACCTTCCTAAAGATCTCAGAAGATACATAAAGCGTGACTTCTGTGGAGAGGAGCTTTTATCATGGGCCTTGGACCCCAACTCATCCTCCTATCTTCCCATTTCAACCAGAACTGTAAAATCTCTATCAGAAGTTGAAGCCTTGGCTCTCATGGCTAACGACTTGAAGCTCATTGCTTCCCAATTTCTACACCTTCACCGCAAACACATCCAACACATTTTCAGGTACTATTCCTTGCAGTGGAGGACATGGGCTGCCTGTTTCATACAACTAGCCTGGCGTGGCCACTGTAAAAGGAAGATGAAGGAATCTTTACGTGAAGCAGAAGATAGGCTACAAGATGCTTTGGCAAAAGAGGAAGGTTCTTCTGTAAGTTTTGGTGCCACCATATATGCAGCAAGGTTTGCTACCAATGCCTTACGCAACCTGAGAAAGAACAATGGGGAACGAAAAAACAATAGAATGCCTCTGCTGCCTCAGAAGCCACCTGAGCCTGATTTCACTTCACAAGCTTCTGGGGTATCTTAG 1026 0.4288 MSCGHQNSNVLSLLSCSCPLKNPDDIDDPSVFNFGIYIDALRSRVVESTTHVPHKIFYCLWWGLRNVSSLGQDLKTSTFIEEIFFTIFISIFGLILFALLIGNVQKYLQSMQSTAVRAEEMRLRKQSIEKWTSQRMLPENLKERIRQNENYKLEQDQDVDEETLIHNLPKDLRRYIKRDFCGEELLSWALDPNSSSYLPISTRTVKSLSEVEALALMANDLKLIASQFLHLHRKHIQHIFRYYSLQWRTWAACFIQLAWRGHCKRKMKESLREAEDRLQDALAKEEGSSVSFGATIYAARFATNALRNLRKNNGERKNNRMPLLPQKPPEPDFTSQASGVS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2143 341 Gene3D Jelly Rolls 133 229 IPR014710 -
Alju05g2143 341 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 15 178 - -
Alju05g2143 341 ProSiteProfiles IQ motif profile. 248 277 IPR000048 GO:0005515
Alju05g2143 341 Coils Coil 264 288 - -
Alju05g2143 341 MobiDBLite consensus disorder prediction 309 341 - -
Alju05g2143 341 SUPERFAMILY Voltage-gated potassium channels 51 148 - -
Alju05g2143 341 Pfam Ion transport protein 55 114 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2143 Alju-ChrAlju05 54705694 54707506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2143 1 334 Ion Channels AT4G01010 45.060 1.34e-103 317